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GENE CARD

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Gene Card

Best human hits

DIS3; DIS3L; DIS3L2

Species

C.savignyi

Unique Gene ID

Cisavi.g00008707

Gene Model ID

Cisavi.CG.ENS81.R5.733848-736397

Location

R5:733847..736397

Transcript Models and Sequences

  Cisavi.CG.ENS81.R5.733848-736397.00877.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
PIN_dom SMART PIN domain
PIN-like_dom_sf SUPERFAMILY PIN-like domain superfamily
Rrp44_CSD1 Pfam Rrp44-like cold shock domain
NA-bd_OB-fold SUPERFAMILY Nucleic acid-binding, OB-fold
RNase_II/R_CS ProSitePatterns Ribonuclease II/R, conserved site
PIN_dom Pfam PIN domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
3'-5'-exoribonuclease activity Hs molecular function
nuclear exosome (RNase complex) Hs cellular component
exosome (RNase complex) Hs cellular component
RNA binding Hs molecular function
nuclease activity Hs molecular function
endonuclease activity Hs molecular function
exonuclease activity Hs molecular function
guanyl-nucleotide exchange factor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
rRNA processing Hs biological process
membrane Hs cellular component
rRNA catabolic process Hs biological process
hydrolase activity Hs molecular function
regulation of mRNA stability Hs biological process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay Hs biological process
regulation of molecular function Hs biological process
CUT catabolic process Hs biological process
nucleic acid phosphodiester bond hydrolysis Hs biological process
RNA phosphodiester bond hydrolysis, exonucleolytic Hs biological process

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
3'-5'-exoribonuclease activity Hs molecular function 1013 0.0
nuclear exosome (RNase complex) Hs cellular component 1013 0.0
cytoplasmic exosome (RNase complex) Hs cellular component 447 1.75e-142
exosome (RNase complex) Hs cellular component 1013 0.0
magnesium ion binding Hs molecular function 287 3.10e-84
P-body Hs cellular component 287 3.10e-84
RNA binding Hs molecular function 1013 0.0
nuclease activity Hs molecular function 1013 0.0
endonuclease activity Hs molecular function 1013 0.0
exonuclease activity Hs molecular function 1013 0.0
ribonuclease activity Hs molecular function 287 3.10e-84
guanyl-nucleotide exchange factor activity Hs molecular function 1013 0.0
protein binding Hs molecular function 1013 0.0
nucleus Hs cellular component 1013 0.0
nucleoplasm Hs cellular component 1013 0.0
cytoplasm Hs cellular component 1013 0.0
centrosome Hs cellular component 447 1.75e-142
cytosol Hs cellular component 1013 0.0
polysome Hs cellular component 287 3.10e-84
plasma membrane Hs cellular component 447 1.75e-142
poly(U) RNA binding Hs molecular function 287 3.10e-84
membrane Hs cellular component 1013 0.0
hydrolase activity Hs molecular function 1013 0.0
enzyme binding Hs molecular function 447 1.75e-142
metal ion binding Hs molecular function 287 3.10e-84

GO (InterProScan)

No result

GO Term Analysis Type e-value