Aniseed - Gene card

Gene Card

Best human hits

MYC; MYCL; MYCN

Species

C.savignyi

Unique Gene ID

Cisavi.g00008638

Gene Model ID

Cisavi.CG.ENS81.R5.239883-255452

Location

R5:239882..255452

Transcript Models and Sequences

Cisavi.CG.ENS81.R5.239883-255452.00660.t
Cisavi.CG.ENS81.R5.239883-255452.00661.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Tscrpt_reg_Myc	PRINTS	Transcription regulator Myc
Tscrpt_reg_Myc_N	Pfam	Transcription regulator Myc, N-terminal
bHLH_dom	Pfam	Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom	ProSiteProfiles	Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf	SUPERFAMILY	Helix-loop-helix DNA-binding domain superfamily
bHLH_dom	SMART	Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom	CDD	Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf	Gene3D	Helix-loop-helix DNA-binding domain superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

103 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G1/S transition of mitotic cell cycle	Hs	biological process
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
MAPK cascade	Hs	biological process
chromatin	Hs	cellular component
nuclear chromatin	Hs	cellular component
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
cartilage condensation	Hs	biological process
ovarian follicle development	Hs	biological process
branching involved in ureteric bud morphogenesis	Hs	biological process
regulation of oxidative phosphorylation	Hs	biological process
DNA binding	Hs	molecular function
double-stranded DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
mRNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nuclear envelope	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
rough endoplasmic reticulum	Hs	cellular component
cytosol	Hs	cellular component
glucose metabolic process	Hs	biological process
energy reserve metabolic process	Hs	biological process
chromatin remodeling	Hs	biological process
transcription, DNA-templated	Hs	biological process
DNA-templated transcription, initiation	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
amino acid transport	Hs	biological process
cellular iron ion homeostasis	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
inner mitochondrial membrane organization	Hs	biological process
cell cycle arrest	Hs	biological process
Notch signaling pathway	Hs	biological process
regulation of mitotic cell cycle	Hs	biological process
transcription factor binding	Hs	molecular function
cell proliferation	Hs	biological process
positive regulation of cell proliferation	Hs	biological process
response to wounding	Hs	biological process
response to gamma radiation	Hs	biological process
regulation of gene expression	Hs	biological process
positive regulation of gene expression	Hs	biological process
negative regulation of gene expression	Hs	biological process
positive regulation of mitochondrial membrane potential	Hs	biological process
positive regulation of cell death	Hs	biological process
oxygen transport	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
protein deubiquitination	Hs	biological process
cytokine-mediated signaling pathway	Hs	biological process
kinase binding	Hs	molecular function
hypothalamus development	Hs	biological process
lung development	Hs	biological process
ovulation	Hs	biological process
response to estradiol	Hs	biological process
cellular response to insulin stimulus	Hs	biological process
negative regulation of stress-activated MAPK cascade	Hs	biological process
macromolecular complex	Hs	cellular component
activating transcription factor binding	Hs	molecular function
cellular response to UV	Hs	biological process
response to drug	Hs	biological process
negative regulation of apoptotic process	Hs	biological process
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process	Hs	biological process
positive regulation of DNA binding	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
nucleoplasmic reticulum	Hs	cellular component
macromolecular complex binding	Hs	molecular function
response to ethanol	Hs	biological process
positive regulation of translation	Hs	biological process
positive regulation of cell cycle	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
protein heterodimerization activity	Hs	molecular function
protein dimerization activity	Hs	molecular function
branching morphogenesis of an epithelial tube	Hs	biological process
positive regulation of epithelial cell proliferation	Hs	biological process
chromosome organization	Hs	biological process
negative regulation of cell division	Hs	biological process
canonical Wnt signaling pathway	Hs	biological process
positive regulation of glial cell proliferation	Hs	biological process
negative regulation of cell death	Hs	biological process
repressing transcription factor binding	Hs	molecular function
response to growth factor	Hs	biological process
E-box binding	Hs	molecular function
eukaryotic initiation factor eIF2 binding	Hs	molecular function
cellular response to retinoic acid	Hs	biological process
cellular response to carbohydrate stimulus	Hs	biological process
cellular response to interferon-gamma	Hs	biological process
cellular response to interleukin-1	Hs	biological process
cellular response to epidermal growth factor stimulus	Hs	biological process
cellular response to estrogen stimulus	Hs	biological process
cellular response to organic cyclic compound	Hs	biological process
cellular response to hypoxia	Hs	biological process
positive regulation of cellular respiration	Hs	biological process
positive regulation of oxidative phosphorylation	Hs	biological process
negative regulation of reactive oxygen species metabolic process	Hs	biological process
positive regulation of response to DNA damage stimulus	Hs	biological process
positive regulation of ATP biosynthetic process	Hs	biological process

GO (Blast)

32 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
chromatin	Hs	cellular component	75.9	2.07e-14
nuclear chromatin	Hs	cellular component	73.2	1.45e-13
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	75.9	2.07e-14
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	75.9	2.07e-14
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	75.9	2.07e-14
DNA binding	Hs	molecular function	75.9	2.07e-14
double-stranded DNA binding	Hs	molecular function	73.2	1.45e-13
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	75.9	2.07e-14
mRNA binding	Hs	molecular function	73.2	1.45e-13
protein binding	Hs	molecular function	75.9	2.07e-14
nucleus	Hs	cellular component	75.9	2.07e-14
nuclear envelope	Hs	cellular component	73.2	1.45e-13
nucleoplasm	Hs	cellular component	73.2	1.45e-13
nucleolus	Hs	cellular component	75.9	2.07e-14
cytoplasm	Hs	cellular component	73.2	1.45e-13
mitochondrion	Hs	cellular component	73.2	1.45e-13
rough endoplasmic reticulum	Hs	cellular component	73.2	1.45e-13
cytosol	Hs	cellular component	73.2	1.45e-13
transcription factor binding	Hs	molecular function	73.2	1.45e-13
membrane	Hs	cellular component	73.2	1.45e-13
integral component of membrane	Hs	cellular component	73.2	1.45e-13
kinase binding	Hs	molecular function	75.9	2.07e-14
macromolecular complex	Hs	cellular component	73.2	1.45e-13
activating transcription factor binding	Hs	molecular function	73.2	1.45e-13
sequence-specific DNA binding	Hs	molecular function	73.2	1.45e-13
nucleoplasmic reticulum	Hs	cellular component	73.2	1.45e-13
macromolecular complex binding	Hs	molecular function	73.2	1.45e-13
protein heterodimerization activity	Hs	molecular function	73.2	1.45e-13
protein dimerization activity	Hs	molecular function	75.9	2.07e-14
repressing transcription factor binding	Hs	molecular function	73.2	1.45e-13
E-box binding	Hs	molecular function	73.2	1.45e-13
eukaryotic initiation factor eIF2 binding	Hs	molecular function	73.2	1.45e-13

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	Pfam	molecular function	1.4E-16
nucleus	PRINTS	cellular component	6.7E-9
regulation of transcription, DNA-templated	Pfam	biological process	1.4E-16
protein dimerization activity	Gene3D	molecular function	2.3E-18