Gene Card
Best human hits
CIRBP; SNRNP35; SNRNP70
Species
Unique Gene ID
Cisavi.g00008527
Gene Model ID
Cisavi.CG.ENS81.R5.1103597-1104130
Location
R5:1103596..1104130
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| RRM_dom | Pfam | RNA recognition motif domain |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | SMART | RNA recognition motif domain |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
14 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| commitment complex | Hs | cellular component |
| mRNA splicing, via spliceosome | Hs | biological process |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| mRNA binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| spliceosomal complex | Hs | cellular component |
| U12-type spliceosomal complex | Hs | cellular component |
| nucleolus | Hs | cellular component |
| mRNA processing | Hs | biological process |
| RNA splicing | Hs | biological process |
| snRNA binding | Hs | molecular function |
| precatalytic spliceosome | Hs | cellular component |
GO (Blast)
23 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| commitment complex | Hs | cellular component | 184 | 6.13e-59 |
| nucleic acid binding | Hs | molecular function | 184 | 6.13e-59 |
| RNA binding | Hs | molecular function | 184 | 6.13e-59 |
| mRNA binding | Hs | molecular function | 184 | 6.13e-59 |
| mRNA 3'-UTR binding | Hs | molecular function | 65.9 | 3.39e-13 |
| protein binding | Hs | molecular function | 83.2 | 4.74e-19 |
| nucleus | Hs | cellular component | 184 | 6.13e-59 |
| nucleoplasm | Hs | cellular component | 184 | 6.13e-59 |
| spliceosomal complex | Hs | cellular component | 184 | 6.13e-59 |
| U1 snRNP | Hs | cellular component | 83.2 | 4.74e-19 |
| U12-type spliceosomal complex | Hs | cellular component | 184 | 6.13e-59 |
| nucleolus | Hs | cellular component | 184 | 6.13e-59 |
| cytoplasm | Hs | cellular component | 83.2 | 4.74e-19 |
| cytoplasmic stress granule | Hs | cellular component | 65.9 | 3.39e-13 |
| nuclear speck | Hs | cellular component | 83.2 | 4.74e-19 |
| snRNA binding | Hs | molecular function | 184 | 6.13e-59 |
| translation repressor activity | Hs | molecular function | 65.9 | 3.39e-13 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 83.2 | 4.74e-19 |
| U1 snRNA binding | Hs | molecular function | 83.2 | 4.74e-19 |
| small ribosomal subunit rRNA binding | Hs | molecular function | 65.9 | 3.39e-13 |
| U2-type prespliceosome | Hs | cellular component | 83.2 | 4.74e-19 |
| precatalytic spliceosome | Hs | cellular component | 184 | 6.13e-59 |
| U1 snRNP binding | Hs | molecular function | 83.2 | 4.74e-19 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 1.88E-29 |
