Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

MALRD1; MDGA1; MDGA2

Species

C.savignyi

Unique Gene ID

Cisavi.g00008496

Gene Model ID

Cisavi.CG.ENS81.R49.900562-907313

Location

R49:900561..907313

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
MAM_dom ProSiteProfiles MAM domain
MAM_dom CDD MAM domain
MAM_dom Pfam MAM domain
LDrepeatLR_classA_rpt ProSiteProfiles Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt CDD Low-density lipoprotein (LDL) receptor class A repeat
CUB_dom ProSiteProfiles CUB domain
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
LDrepeatLR_classA_rpt SMART Low-density lipoprotein (LDL) receptor class A repeat
MAM_dom SMART MAM domain
LDLR_class-A_CS ProSitePatterns Low-density lipoprotein (LDL) receptor class A, conserved site
LDrepeatLR_classA_rpt Pfam Low-density lipoprotein (LDL) receptor class A repeat
Sperma_CUB_dom_sf SUPERFAMILY Spermadhesin, CUB domain superfamily
CUB_dom CDD CUB domain
Sperma_CUB_dom_sf Gene3D Spermadhesin, CUB domain superfamily
LDL_receptor-like_sf SUPERFAMILY LDL receptor-like superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 113 9.91e-27
extracellular region Hs cellular component 93.6 3.01e-20
extracellular space Hs cellular component 93.6 3.01e-20
cytoplasm Hs cellular component 113 9.91e-27
Golgi apparatus Hs cellular component 113 9.91e-27
plasma membrane Hs cellular component 93.6 3.01e-20
membrane Hs cellular component 113 9.91e-27
integral component of membrane Hs cellular component 113 9.91e-27
cytoplasmic vesicle membrane Hs cellular component 113 9.91e-27
anchored component of membrane Hs cellular component 93.6 3.01e-20
cytoplasmic vesicle Hs cellular component 113 9.91e-27
anchored component of plasma membrane Hs cellular component 93.6 3.01e-20

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding CDD molecular function 2.8963E-11
membrane CDD cellular component 1.17607E-43