Login
Help

GENE CARD

Submit your Data

  1. Gene 'Cisavi.CG.ENS81.R49....'

Gene Card

Best human hits

RDH11; RDH13; RDH14

Species

C.savignyi

Unique Gene ID

Cisavi.g00008370

Gene Model ID

Cisavi.CG.ENS81.R49.2305851-2311383

Location

R49:2305850..2311383

Transcript Models and Sequences

  Cisavi.CG.ENS81.R49.2305851-2311383.16247.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
SDR_fam Pfam Short-chain dehydrogenase/reductase SDR
NAD(P)-bd_dom_sf SUPERFAMILY NAD(P)-binding domain superfamily
SDR_fam PRINTS Short-chain dehydrogenase/reductase SDR

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
retinoid metabolic process Hs biological process
photoreceptor inner segment Hs cellular component
retinol dehydrogenase activity Hs molecular function
intracellular Hs cellular component
mitochondrion Hs cellular component
mitochondrial inner membrane Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
retina layer formation Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
adaptation of rhodopsin mediated signaling Hs biological process
oxidoreductase activity Hs molecular function
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Hs molecular function
eye photoreceptor cell development Hs biological process
retinol metabolic process Hs biological process
retinal metabolic process Hs biological process
NADP-retinol dehydrogenase activity Hs molecular function
oxidation-reduction process Hs biological process
protein binding Hs molecular function
intracellular protein transport Hs biological process
visual perception Hs biological process
vesicle-mediated transport Hs biological process
photoreceptor cell maintenance Hs biological process
response to stimulus Hs biological process
photoreceptor inner segment membrane Hs cellular component

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
photoreceptor inner segment Hs cellular component 215 1.43e-68
retinol dehydrogenase activity Hs molecular function 215 1.43e-68
intracellular Hs cellular component 215 1.43e-68
nucleus Hs cellular component 224 1.49e-71
mitochondrion Hs cellular component 224 1.49e-71
mitochondrial inner membrane Hs cellular component 214 7.48e-68
lysosomal membrane Hs cellular component 224 1.49e-71
endoplasmic reticulum Hs cellular component 224 1.49e-71
endoplasmic reticulum membrane Hs cellular component 224 1.49e-71
alcohol dehydrogenase (NADP+) activity Hs molecular function 224 1.49e-71
membrane Hs cellular component 224 1.49e-71
integral component of membrane Hs cellular component 215 1.43e-68
oxidoreductase activity Hs molecular function 224 1.49e-71
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Hs molecular function 215 1.43e-68
NADP-retinol dehydrogenase activity Hs molecular function 224 1.49e-71

GO (InterProScan)

No result

GO Term Analysis Type e-value