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GENE CARD

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Gene Card

Best human hits

COL12A1; TNC; TNR

Species

C.savignyi

Unique Gene ID

Cisavi.g00006748

Gene Model ID

Cisavi.CG.ENS81.R35.1259150-1265019

Location

R35:1259149..1265019

Transcript Models and Sequences

  Cisavi.CG.ENS81.R35.1259150-1265019.12416.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Ig-like_fold Gene3D Immunoglobulin-like fold
FN3_dom ProSiteProfiles Fibronectin type III
FN3_dom CDD Fibronectin type III
FN3_sf SUPERFAMILY Fibronectin type III superfamily
FN3_dom Pfam Fibronectin type III
FN3_dom SMART Fibronectin type III

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 64.3 1.47e-11
extracellular region Hs cellular component 64.3 1.47e-11
proteinaceous extracellular matrix Hs cellular component 64.3 1.47e-11
collagen trimer Hs cellular component 64.3 1.47e-11
collagen type XII trimer Hs cellular component 64.3 1.47e-11
basement membrane Hs cellular component 56.6 5.56e-09
interstitial matrix Hs cellular component 56.6 5.56e-09
extracellular space Hs cellular component 64.3 1.47e-11
endoplasmic reticulum lumen Hs cellular component 64.3 1.47e-11
focal adhesion Hs cellular component 56.6 5.56e-09
cell surface Hs cellular component 61.2 1.57e-10
membrane Hs cellular component 56.6 5.56e-09
extracellular matrix structural constituent conferring tensile strength Hs molecular function 64.3 1.47e-11
extracellular matrix Hs cellular component 64.3 1.47e-11
membrane raft Hs cellular component 61.2 1.57e-10
syndecan binding Hs molecular function 56.6 5.56e-09
extracellular exosome Hs cellular component 64.3 1.47e-11
perineuronal net Hs cellular component 61.2 1.57e-10
extracellular vesicle Hs cellular component 64.3 1.47e-11

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 1.78E-12