Aniseed - Gene card

Gene 'Cisavi.CG.ENS81.R27....'

Gene Card

Best human hits

AL121581.1; MYT1

Species

C.savignyi

Unique Gene ID

Cisavi.g00005779

Gene Model ID

Cisavi.CG.ENS81.R27.724525-731696

Location

R27:724524..731696

Transcript Models and Sequences

Cisavi.CG.ENS81.R27.724525-731696.15901.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Znf_C2HC_sf	SUPERFAMILY	Zinc finger, C2HC-type superfamily
Znf_C2HC	Pfam	Zinc finger, C2HC-type
Znf_C2HC	ProSiteProfiles	Zinc finger, C2HC-type

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytosol	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
nervous system development	Hs	biological process
zinc ion binding	Hs	molecular function
cell differentiation	Hs	biological process
metal ion binding	Hs	molecular function
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
core promoter binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
chromosome	Hs	cellular component
negative regulation of cell proliferation	Hs	biological process
neuron differentiation	Hs	biological process
protein-DNA complex	Hs	cellular component
tumor necrosis factor-mediated signaling pathway	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
neuron fate commitment	Hs	biological process
neuron fate specification	Hs	biological process
neuron development	Hs	biological process
interleukin-1-mediated signaling pathway	Hs	biological process
positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway	Hs	biological process

GO (Blast)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	127	2.28e-29
DNA binding	Hs	molecular function	127	2.28e-29
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	127	2.28e-29
protein binding	Hs	molecular function	127	2.28e-29
nucleus	Hs	cellular component	127	2.28e-29
nucleoplasm	Hs	cellular component	127	2.28e-29
cytosol	Hs	cellular component	127	2.28e-29
zinc ion binding	Hs	molecular function	127	2.28e-29
metal ion binding	Hs	molecular function	127	2.28e-29

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	Pfam	molecular function	1.2E-14
nucleus	Pfam	cellular component	1.2E-14
regulation of transcription, DNA-templated	Pfam	biological process	1.2E-14
zinc ion binding	Pfam	molecular function	1.2E-14