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  1. Gene 'Boschl.CG.Botznik201...' > 
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Gene Card

Best human hits

G3BP1; G3BP2; RBM34

Species

C.savignyi

Unique Gene ID

Cisavi.g00005739

Gene Model ID

Cisavi.CG.ENS81.R27.315248-322198

Location

R27:315247..322198

Transcript Models and Sequences

  Cisavi.CG.ENS81.R27.315248-322198.14078.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
RRM_dom Pfam RNA recognition motif domain
Nuclear_transport_factor_2_euk ProSiteProfiles Nuclear transport factor 2, eukaryote
G3BP2 PANTHER Ras GTPase-activating protein-binding protein 2
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
RRM_dom SMART RNA recognition motif domain
NTF2 Pfam Nuclear transport factor 2
NTF2-like_dom_sf SUPERFAMILY NTF2-like domain superfamily
RRM_dom ProSiteProfiles RNA recognition motif domain
Nuclear_transport_factor_2_euk CDD Nuclear transport factor 2, eukaryote
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
RNA binding Hs molecular function
mRNA binding Hs molecular function
ATP-dependent DNA helicase activity Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
nuclease activity Hs molecular function
endonuclease activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
focal adhesion Hs cellular component
Ras protein signal transduction Hs biological process
cytoplasmic stress granule Hs cellular component
membrane Hs cellular component
hydrolase activity Hs molecular function
receptor signaling complex scaffold activity Hs molecular function
intracellular ribonucleoprotein complex Hs cellular component
DNA duplex unwinding Hs biological process
stress granule assembly Hs biological process
mRNA transport Hs biological process
negative regulation of canonical Wnt signaling pathway Hs biological process
nucleic acid phosphodiester bond hydrolysis Hs biological process

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 293 1.70e-94
nucleic acid binding Hs molecular function 295 4.37e-95
DNA binding Hs molecular function 293 1.70e-94
RNA binding Hs molecular function 295 4.37e-95
mRNA binding Hs molecular function 295 4.37e-95
ATP-dependent DNA helicase activity Hs molecular function 293 1.70e-94
ATP-dependent RNA helicase activity Hs molecular function 293 1.70e-94
helicase activity Hs molecular function 293 1.70e-94
nuclease activity Hs molecular function 293 1.70e-94
endonuclease activity Hs molecular function 293 1.70e-94
protein binding Hs molecular function 295 4.37e-95
ATP binding Hs molecular function 293 1.70e-94
nucleus Hs cellular component 293 1.70e-94
nucleolus Hs cellular component 62.0 2.28e-10
cytoplasm Hs cellular component 295 4.37e-95
cytosol Hs cellular component 295 4.37e-95
plasma membrane Hs cellular component 293 1.70e-94
focal adhesion Hs cellular component 293 1.70e-94
cytoplasmic stress granule Hs cellular component 293 1.70e-94
membrane Hs cellular component 293 1.70e-94
hydrolase activity Hs molecular function 293 1.70e-94
receptor signaling complex scaffold activity Hs molecular function 295 4.37e-95
intracellular ribonucleoprotein complex Hs cellular component 295 4.37e-95

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 3.63E-22
stress granule assembly PANTHER biological process 1.2E-114

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