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GENE CARD

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Gene Card

Best human hits

AF241726.2; TSPAN6; TSPAN7

Species

C.savignyi

Unique Gene ID

Cisavi.g00005644

Gene Model ID

Cisavi.CG.ENS81.R27.1640425-1644774

Location

R27:1640424..1644774

Transcript Models and Sequences

  Cisavi.CG.ENS81.R27.1640425-1644774.18038.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Tetraspanin_EC2_sf Gene3D Tetraspanin, EC2 domain superfamily
Tetraspanin_EC2_sf SUPERFAMILY Tetraspanin, EC2 domain superfamily
Tetraspanin/Peripherin Pfam Tetraspanin/Peripherin
Tetraspanin PIRSF Tetraspanin
Tetraspanin_CS ProSitePatterns Tetraspanin, conserved site
Tetraspanin PRINTS Tetraspanin

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
signal transducer activity Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
integral component of plasma membrane Hs cellular component
cell surface receptor signaling pathway Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
viral process Hs biological process
positive regulation of I-kappaB kinase/NF-kappaB signaling Hs biological process
extracellular exosome Hs cellular component
negative regulation of NIK/NF-kappaB signaling Hs biological process

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
signal transducer activity Hs molecular function 167 3.63e-51
calcium ion binding Hs molecular function 153 2.26e-45
protein binding Hs molecular function 167 3.63e-51
extracellular region Hs cellular component 153 2.26e-45
integral component of plasma membrane Hs cellular component 175 4.24e-54
membrane Hs cellular component 175 4.24e-54
integral component of membrane Hs cellular component 175 4.24e-54
extracellular exosome Hs cellular component 167 3.63e-51

GO (InterProScan)

1 result

GO Term Analysis Type e-value
integral component of membrane PIRSF cellular component 7.6E-49