Login
Help

GENE CARD

Submit your Data

  1. Gene 'Moocci.CG.ELv1_2.S65...'
  2. Gene 'Cisavi.CG.ENS81.R27....'

Gene Card

Best human hits

VPS53

Species

C.savignyi

Unique Gene ID

Cisavi.g00005589

Gene Model ID

Cisavi.CG.ENS81.R27.1187088-1189415

Location

R27:1187087..1189415

Transcript Models and Sequences

  Cisavi.CG.ENS81.R27.1187088-1189415.16826.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
Vps53_N Pfam Vps53-like, N-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
GARP complex Hs cellular component
protein binding Hs molecular function
endosome Hs cellular component
Golgi apparatus Hs cellular component
trans-Golgi network Hs cellular component
cytosol Hs cellular component
lysosomal transport Hs biological process
endosome membrane Hs cellular component
protein transport Hs biological process
membrane Hs cellular component
endocytic recycling Hs biological process
trans-Golgi network membrane Hs cellular component
retrograde transport, endosome to Golgi Hs biological process
perinuclear region of cytoplasm Hs cellular component
recycling endosome Hs cellular component
EARP complex Hs cellular component

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
GARP complex Hs cellular component 896 0.0
protein binding Hs molecular function 896 0.0
endosome Hs cellular component 896 0.0
Golgi apparatus Hs cellular component 896 0.0
trans-Golgi network Hs cellular component 896 0.0
cytosol Hs cellular component 896 0.0
endosome membrane Hs cellular component 896 0.0
membrane Hs cellular component 896 0.0
trans-Golgi network membrane Hs cellular component 896 0.0
perinuclear region of cytoplasm Hs cellular component 896 0.0
recycling endosome Hs cellular component 896 0.0
EARP complex Hs cellular component 896 0.0

GO (InterProScan)

No result

GO Term Analysis Type e-value