Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

ATG10; ATG3

Species

C.savignyi

Unique Gene ID

Cisavi.g00005587

Gene Model ID

Cisavi.CG.ENS81.R27.1148014-1150903

Location

R27:1148013..1150903

Transcript Models and Sequences

  Cisavi.CG.ENS81.R27.1148014-1150903.16817.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Autophagy-rel_prot_3_C Pfam Autophagy-related protein 3, C-terminal
Autophagy-rel_prot_3_N Pfam Autophagy-related protein 3, N-terminal
Autophagy-rel_prot_3 Pfam Autophagy-related protein 3

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
autophagosome assembly Hs biological process
cytoplasmic ubiquitin ligase complex Hs cellular component
autophagy of mitochondrion Hs biological process
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
cellular protein modification process Hs biological process
protein targeting to membrane Hs biological process
autophagy Hs biological process
protein transport Hs biological process
macroautophagy Hs biological process
protein ubiquitination Hs biological process
transferase activity Hs molecular function
Atg8 ligase activity Hs molecular function
Atg12 transferase activity Hs molecular function
ubiquitin-like protein transferase activity Hs molecular function
enzyme binding Hs molecular function
mitochondrial fragmentation involved in apoptotic process Hs biological process
autophagy of nucleus Hs biological process
regulation of cilium assembly Hs biological process

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
cytoplasmic ubiquitin ligase complex Hs cellular component 404 2.01e-142
protein binding Hs molecular function 404 2.01e-142
intracellular Hs cellular component 40.0 7.41e-04
cytoplasm Hs cellular component 404 2.01e-142
cytosol Hs cellular component 404 2.01e-142
transferase activity Hs molecular function 404 2.01e-142
Atg8 ligase activity Hs molecular function 404 2.01e-142
Atg12 transferase activity Hs molecular function 404 2.01e-142
ubiquitin-like protein transferase activity Hs molecular function 404 2.01e-142
enzyme binding Hs molecular function 404 2.01e-142

GO (InterProScan)

No result

GO Term Analysis Type e-value