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GENE CARD

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  1. Gene 'Cisavi.CG.ENS81.R268...'

Gene Card

Best human hits

DAZL; PABPC1L; TRNAU1AP

Species

C.savignyi

Unique Gene ID

Cisavi.g00005547

Gene Model ID

Cisavi.CG.ENS81.R268.365159-368426

Location

R268:365158..368426

External Database Gene Card

External database links

No result

Collections
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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
SECp43_RRM2 CDD SECp43, RNA recognition motif 2
RRM_dom SMART RNA recognition motif domain
RRM_dom ProSiteProfiles RNA recognition motif domain
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RRM_dom Pfam RNA recognition motif domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

6 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
selenocysteine incorporation Hs biological process
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
translation Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 130 6.33e-37
RNA binding Hs molecular function 130 6.33e-37
mRNA binding Hs molecular function 54.3 1.09e-08
mRNA 3'-UTR binding Hs molecular function 54.3 1.09e-08
protein binding Hs molecular function 54.3 1.09e-08
intracellular Hs cellular component 54.3 1.09e-08
nucleus Hs cellular component 130 6.33e-37
cytoplasm Hs cellular component 130 6.33e-37
polysome Hs cellular component 54.3 1.09e-08
translation activator activity Hs molecular function 54.3 1.09e-08
macromolecular complex Hs cellular component 54.3 1.09e-08
identical protein binding Hs molecular function 54.3 1.09e-08
extracellular exosome Hs cellular component 60.5 1.37e-10

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 1.05E-19