Login
Help

GENE CARD

Submit your Data

  1. Gene 'Cisavi.CG.ENS81.R247...'
  2. Gene 'Cisavi.CG.ENS81.R26....'

Gene Card

Best human hits

GBE1

Species

C.savignyi

Unique Gene ID

Cisavi.g00005455

Gene Model ID

Cisavi.CG.ENS81.R26.442042-450152

Location

R26:442041..450152

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Branching_enzy PANTHER 1,4-alpha-glucan-branching enzyme
A-amylase/branching_C Pfam Alpha-amylase/branching enzyme, C-terminal all beta
Glyco_hydro_b Gene3D Glycosyl hydrolase, all-beta
Ig-like_fold Gene3D Immunoglobulin-like fold
Glyco_hydro_13_N Pfam Glycoside hydrolase, family 13, N-terminal
Branching_enzy PIRSF 1,4-alpha-glucan-branching enzyme
Glyco_hydro_13_cat_dom SMART Glycosyl hydrolase, family 13, catalytic domain
Ig_E-set SUPERFAMILY Immunoglobulin E-set
Glyco_hydro_13_cat_dom Pfam Glycosyl hydrolase, family 13, catalytic domain
Glycoside_hydrolase_SF SUPERFAMILY Glycoside hydrolase superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
catalytic activity Hs molecular function 685 0.0
1,4-alpha-glucan branching enzyme activity Hs molecular function 685 0.0
hydrolase activity, hydrolyzing O-glycosyl compounds Hs molecular function 685 0.0
protein binding Hs molecular function 685 0.0
cytosol Hs cellular component 685 0.0
transferase activity Hs molecular function 685 0.0
transferase activity, transferring glycosyl groups Hs molecular function 685 0.0
carbohydrate binding Hs molecular function 685 0.0
cation binding Hs molecular function 685 0.0
extracellular exosome Hs cellular component 685 0.0
1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) Hs molecular function 685 0.0

GO (InterProScan)

6 results

GO Term Analysis Type e-value
catalytic activity Pfam molecular function 1.6E-16
1,4-alpha-glucan branching enzyme activity PANTHER molecular function 9.4E-23
hydrolase activity, hydrolyzing O-glycosyl compounds Pfam molecular function 3.6E-9
carbohydrate metabolic process Pfam biological process 1.6E-16
glycogen biosynthetic process PANTHER biological process 9.4E-23
cation binding Pfam molecular function 1.6E-16