Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

NCOA7; OXR1; TLDC2

Species

C.savignyi

Unique Gene ID

Cisavi.g00005286

Gene Model ID

Cisavi.CG.ENS81.R251.172502-196442

Location

R251:172501..196442

Transcript Models and Sequences

  Cisavi.CG.ENS81.R251.172502-196442.03270.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
TLDc_dom SMART TLDc domain
LysM_dom SMART LysM domain
LysM_dom ProSiteProfiles LysM domain
TLDc_dom Pfam TLDc domain
LysM_dom Pfam LysM domain
LysM_dom_sf Gene3D LysM domain superfamily
LysM_dom CDD LysM domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 248 4.25e-71
intracellular Hs cellular component 248 4.25e-71
nucleus Hs cellular component 248 4.25e-71
nucleoplasm Hs cellular component 251 1.28e-72
nucleolus Hs cellular component 251 1.28e-72
mitochondrion Hs cellular component 251 1.28e-72
oxidoreductase activity Hs molecular function 251 1.28e-72
ligand-dependent nuclear receptor transcription coactivator activity Hs molecular function 248 4.25e-71
nuclear hormone receptor binding Hs molecular function 248 4.25e-71
intracellular membrane-bounded organelle Hs cellular component 251 1.28e-72

GO (InterProScan)

No result

GO Term Analysis Type e-value