Login
Help

GENE CARD

Submit your Data

  1. Gene 'Cisavi.CG.ENS81.R21....'

Gene Card

Best human hits

TUBB; TUBB2B; TUBB4B

Species

C.savignyi

Unique Gene ID

Cisavi.g00004369

Gene Model ID

Cisavi.CG.ENS81.R21.1123677-1126701

Location

R21:1123676..1126701

Transcript Models and Sequences

  Cisavi.CG.ENS81.R21.1123677-1126701.07933.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
Tubulin/FtsZ_C_sf Gene3D Tubulin/FtsZ, C-terminal domain superfamily
Tubulin_C Gene3D Tubulin, C-terminal
Tubulin_CS ProSitePatterns Tubulin, conserved site
Tubulin_FtsZ_GTPase SMART Tubulin/FtsZ, GTPase domain
Tubulin/FtsZ_GTPase_sf SUPERFAMILY Tubulin/FtsZ, GTPase domain superfamily
Beta_tubulin PRINTS Beta tubulin
Tub_FtsZ_C SUPERFAMILY Tubulin/FtsZ, C-terminal
Beta-tubulin_BS ProSitePatterns Beta tubulin, autoregulation binding site
Tubulin/FtsZ_2-layer-sand-dom Pfam Tubulin/FtsZ, 2-layer sandwich domain
Tubulin PRINTS Tubulin
Tubulin_FtsZ_GTPase Pfam Tubulin/FtsZ, GTPase domain
Tubulin PANTHER Tubulin
Tubulin/FtsZ_GTPase_sf Gene3D Tubulin/FtsZ, GTPase domain superfamily
Beta_tubulin PANTHER Beta tubulin
Tubulin/FtsZ_2-layer-sand-dom SMART Tubulin/FtsZ, 2-layer sandwich domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 926 0.0
double-stranded RNA binding Hs molecular function 926 0.0
GTPase activity Hs molecular function 926 0.0
structural molecule activity Hs molecular function 910 0.0
structural constituent of cytoskeleton Hs molecular function 926 0.0
protein binding Hs molecular function 915 0.0
GTP binding Hs molecular function 926 0.0
extracellular region Hs cellular component 926 0.0
nucleus Hs cellular component 926 0.0
nuclear envelope lumen Hs cellular component 910 0.0
cytoplasm Hs cellular component 926 0.0
cytosol Hs cellular component 926 0.0
cytoskeleton Hs cellular component 926 0.0
microtubule Hs cellular component 926 0.0
microtubule cytoskeleton Hs cellular component 915 0.0
ubiquitin protein ligase binding Hs molecular function 910 0.0
azurophil granule lumen Hs cellular component 926 0.0
cytoplasmic ribonucleoprotein granule Hs cellular component 910 0.0
MHC class I protein binding Hs molecular function 926 0.0
myelin sheath Hs cellular component 926 0.0
cell body Hs cellular component 910 0.0
protein heterodimerization activity Hs molecular function 915 0.0
unfolded protein binding Hs molecular function 926 0.0
extracellular exosome Hs cellular component 926 0.0
extracellular vesicle Hs cellular component 926 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
GTPase activity SMART molecular function 2.1E-69
structural constituent of cytoskeleton PANTHER molecular function 0.0
GTP binding PANTHER molecular function 0.0
microtubule PANTHER cellular component 0.0
microtubule-based process PANTHER biological process 0.0