Gene Card
Best human hits
LEMD3; RBM23; RBM39
Species
Unique Gene ID
Cisavi.g00003960
Gene Model ID
Cisavi.CG.ENS81.R19.651241-652635
Location
R19:651240..652635
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| RRM_dom | Pfam | RNA recognition motif domain |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RBM39_SF | TIGRFAM | Splicing factor, RBM39-like |
| RBM39_linker | Pfam | Splicing factor RBM39, linker |
| RRM_dom | SMART | RNA recognition motif domain |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
15 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| microtubule organizing center | Hs | cellular component |
| transcription, DNA-templated | Hs | biological process |
| regulation of transcription, DNA-templated | Hs | biological process |
| RNA processing | Hs | biological process |
| mRNA processing | Hs | biological process |
| RNA splicing | Hs | biological process |
| microtubule cytoskeleton | Hs | cellular component |
| membrane | Hs | cellular component |
| nuclear speck | Hs | cellular component |
| macromolecular complex | Hs | cellular component |
GO (Blast)
16 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 462 | 5.82e-160 |
| DNA binding | Hs | molecular function | 103 | 2.03e-23 |
| RNA binding | Hs | molecular function | 462 | 5.82e-160 |
| protein binding | Hs | molecular function | 462 | 5.82e-160 |
| nucleus | Hs | cellular component | 462 | 5.82e-160 |
| nuclear inner membrane | Hs | cellular component | 103 | 2.03e-23 |
| integral component of nuclear inner membrane | Hs | cellular component | 103 | 2.03e-23 |
| nucleoplasm | Hs | cellular component | 462 | 5.82e-160 |
| microtubule organizing center | Hs | cellular component | 462 | 5.82e-160 |
| microtubule cytoskeleton | Hs | cellular component | 462 | 5.82e-160 |
| membrane | Hs | cellular component | 317 | 3.70e-104 |
| integral component of membrane | Hs | cellular component | 103 | 2.03e-23 |
| nuclear speck | Hs | cellular component | 462 | 5.82e-160 |
| chromatin DNA binding | Hs | molecular function | 103 | 2.03e-23 |
| nuclear membrane | Hs | cellular component | 103 | 2.03e-23 |
| macromolecular complex | Hs | cellular component | 462 | 5.82e-160 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 6.79E-30 |
| RNA binding | TIGRFAM | molecular function | 3.2E-139 |
| nucleus | TIGRFAM | cellular component | 3.2E-139 |
| mRNA processing | TIGRFAM | biological process | 3.2E-139 |
