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Gene Card

Best human hits

ACTA1; ACTL6A; ACTL6B

Species

C.savignyi

Unique Gene ID

Cisavi.g00003940

Gene Model ID

Cisavi.CG.ENS81.R19.5096439-5098125

Location

R19:5096438..5098125

Transcript Models and Sequences

  Cisavi.CG.ENS81.R19.5096439-5098125.19990.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Actin Pfam Actin family
Actin PRINTS Actin family
Actin SMART Actin family
Actin_CS ProSitePatterns Actin, conserved site
Actin PANTHER Actin family

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nuclear chromatin Hs cellular component
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function
neural retina development Hs biological process
chromatin binding Hs molecular function
transcription coactivator activity Hs molecular function
structural constituent of cytoskeleton Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
plasma membrane Hs cellular component
DNA repair Hs biological process
DNA recombination Hs biological process
chromatin organization Hs biological process
chromatin remodeling Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
cellular response to DNA damage stimulus Hs biological process
cytoskeleton organization Hs biological process
signal transduction Hs biological process
nervous system development Hs biological process
SWI/SNF complex Hs cellular component
protein deubiquitination Hs biological process
spinal cord development Hs biological process
Ino80 complex Hs cellular component
nucleosomal DNA binding Hs molecular function
macromolecular complex Hs cellular component
NuA4 histone acetyltransferase complex Hs cellular component
regulation of growth Hs biological process
ATP-dependent chromatin remodeling Hs biological process
histone H4 acetylation Hs biological process
histone H2A acetylation Hs biological process
npBAF complex Hs cellular component
nBAF complex Hs cellular component

GO (Blast)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 230 6.78e-72
nuclear chromatin Hs cellular component 564 0.0
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 564 0.0
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 564 0.0
stress fiber Hs cellular component 230 6.78e-72
chromatin binding Hs molecular function 564 0.0
transcription coactivator activity Hs molecular function 572 0.0
structural constituent of cytoskeleton Hs molecular function 572 0.0
protein binding Hs molecular function 564 0.0
ATP binding Hs molecular function 230 6.78e-72
extracellular space Hs cellular component 230 6.78e-72
nucleus Hs cellular component 572 0.0
nucleoplasm Hs cellular component 564 0.0
nucleolus Hs cellular component 572 0.0
cytoplasm Hs cellular component 230 6.78e-72
cytosol Hs cellular component 230 6.78e-72
cytoskeleton Hs cellular component 230 6.78e-72
striated muscle thin filament Hs cellular component 230 6.78e-72
actin filament Hs cellular component 230 6.78e-72
plasma membrane Hs cellular component 564 0.0
actin cytoskeleton Hs cellular component 230 6.78e-72
SWI/SNF complex Hs cellular component 572 0.0
myosin binding Hs molecular function 230 6.78e-72
sarcomere Hs cellular component 230 6.78e-72
lamellipodium Hs cellular component 230 6.78e-72
filopodium Hs cellular component 230 6.78e-72
Ino80 complex Hs cellular component 564 0.0
nucleosomal DNA binding Hs molecular function 564 0.0
macromolecular complex Hs cellular component 564 0.0
NuA4 histone acetyltransferase complex Hs cellular component 564 0.0
ADP binding Hs molecular function 230 6.78e-72
cell body Hs cellular component 230 6.78e-72
extracellular exosome Hs cellular component 230 6.78e-72
npBAF complex Hs cellular component 564 0.0
nBAF complex Hs cellular component 572 0.0
blood microparticle Hs cellular component 230 6.78e-72

GO (InterProScan)

No result

GO Term Analysis Type e-value

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