Aniseed - Gene card

Gene Card

Best human hits

SLC30A9; XPA

Species

C.savignyi

Unique Gene ID

Cisavi.g00003808

Gene Model ID

Cisavi.CG.ENS81.R19.3411755-3423193

Location

R19:3411754..3423193

Transcript Models and Sequences

Cisavi.CG.ENS81.R19.3411755-3423193.17910.t
Cisavi.CG.ENS81.R19.3411755-3423193.17911.t
Cisavi.CG.ENS81.R19.3411755-3423193.17912.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
XPA_sf	Gene3D	XPA domain superfamily
Cation_efflux_TMD_sf	Gene3D	Cation efflux transmembrane domain superfamily
DNA-bd_dom_put_sf	SUPERFAMILY	Putative DNA-binding domain superfamily
Cation_efflux	TIGRFAM	Cation efflux protein
Cation_efflux_TMD_sf	SUPERFAMILY	Cation efflux transmembrane domain superfamily
Cation_efflux	Pfam	Cation efflux protein
TBORCS5	PANTHER	BLOC-1-related complex subunit 5
TBORCS5	Pfam	BLOC-1-related complex subunit 5

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
cytoskeleton	Hs	cellular component
nucleotide-excision repair	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
ion transport	Hs	biological process
cation transport	Hs	biological process
zinc II ion transport	Hs	biological process
cellular zinc ion homeostasis	Hs	biological process
cation transmembrane transporter activity	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
ligand-dependent nuclear receptor binding	Hs	molecular function
ligand-dependent nuclear receptor transcription coactivator activity	Hs	molecular function
cytoplasmic vesicle	Hs	cellular component
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
transmembrane transport	Hs	biological process
cation transmembrane transport	Hs	biological process

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide-excision repair factor 1 complex	Hs	cellular component	39.3	0.003
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	474	2.73e-164
DNA binding	Hs	molecular function	39.3	0.003
chromatin binding	Hs	molecular function	474	2.73e-164
damaged DNA binding	Hs	molecular function	39.3	0.003
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	474	2.73e-164
protein binding	Hs	molecular function	39.3	0.003
nucleus	Hs	cellular component	474	2.73e-164
nucleoplasm	Hs	cellular component	39.3	0.003
DNA replication factor A complex	Hs	cellular component	39.3	0.003
cytoplasm	Hs	cellular component	474	2.73e-164
endoplasmic reticulum	Hs	cellular component	474	2.73e-164
cytoskeleton	Hs	cellular component	474	2.73e-164
cation transmembrane transporter activity	Hs	molecular function	474	2.73e-164
membrane	Hs	cellular component	474	2.73e-164
integral component of membrane	Hs	cellular component	474	2.73e-164
ligand-dependent nuclear receptor binding	Hs	molecular function	474	2.73e-164
protein domain specific binding	Hs	molecular function	39.3	0.003
ligand-dependent nuclear receptor transcription coactivator activity	Hs	molecular function	474	2.73e-164
cytoplasmic vesicle	Hs	cellular component	474	2.73e-164
protein homodimerization activity	Hs	molecular function	39.3	0.003
intercellular bridge	Hs	cellular component	39.3	0.003
metal ion binding	Hs	molecular function	39.3	0.003

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
cation transport	Pfam	biological process	1.3E-30
cation transmembrane transporter activity	Pfam	molecular function	1.3E-30
integral component of membrane	Pfam	cellular component	1.3E-30
transmembrane transport	Pfam	biological process	1.3E-30
lysosome localization	PANTHER	biological process	2.4E-43