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GENE CARD

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Gene Card

Best human hits

OVOL1; RREB1; ZFPM1

Species

C.savignyi

Unique Gene ID

Cisavi.g00002303

Gene Model ID

Cisavi.CG.ENS81.R140.807979-811690

Location

R140:807978..811690

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 66.6 1.66e-12
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 50.4 3.65e-07
RNA polymerase II core promoter sequence-specific DNA binding Hs molecular function 66.6 1.66e-12
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 66.6 1.66e-12
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 50.4 3.65e-07
RNA polymerase II transcription factor binding Hs molecular function 50.4 3.65e-07
RNA polymerase II activating transcription factor binding Hs molecular function 50.4 3.65e-07
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 66.6 1.66e-12
fibrillar center Hs cellular component 66.6 1.66e-12
nucleic acid binding Hs molecular function 66.6 1.66e-12
DNA binding Hs molecular function 66.6 1.66e-12
transcription factor activity, sequence-specific DNA binding Hs molecular function 66.6 1.66e-12
protein binding Hs molecular function 50.4 3.65e-07
nucleus Hs cellular component 66.6 1.66e-12
nucleoplasm Hs cellular component 50.4 3.65e-07
transcription factor complex Hs cellular component 50.4 3.65e-07
cytoplasm Hs cellular component 66.6 1.66e-12
transcription factor binding Hs molecular function 50.4 3.65e-07
nuclear body Hs cellular component 66.6 1.66e-12
nuclear speck Hs cellular component 66.6 1.66e-12
transcriptional repressor complex Hs cellular component 50.4 3.65e-07
metal ion binding Hs molecular function 66.6 1.66e-12
extracellular exosome Hs cellular component 66.6 1.66e-12

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 0.011