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GENE CARD

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Gene Card

Best human hits

FOXA2; FOXB1; FOXB2

Species

C.savignyi

Unique Gene ID

Cisavi.g00001844

Gene Model ID

Cisavi.CG.ENS81.R130.37003-37917

Location

R130:37002..37917

Transcript Models and Sequences

  Cisavi.CG.ENS81.R130.37003-37917.04433.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Fork_head_dom PRINTS Fork head domain
Fork_head_dom ProSiteProfiles Fork head domain
TF_fork_head_CS_1 ProSitePatterns Fork head domain conserved site1
TF_fork_head_CS_2 ProSitePatterns Fork head domain conserved site 2
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
Fork_head_dom SMART Fork head domain
Fork_head_dom CDD Fork head domain
Fork_head_dom Pfam Fork head domain
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
urogenital system development Hs biological process
somitogenesis Hs biological process
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
axon target recognition Hs biological process
visual learning Hs biological process
anatomical structure morphogenesis Hs biological process
spinal cord development Hs biological process
thalamus development Hs biological process
hypothalamus cell migration Hs biological process
telencephalon cell migration Hs biological process
cell differentiation Hs biological process
midbrain development Hs biological process
floor plate development Hs biological process
negative regulation of neuron apoptotic process Hs biological process
sequence-specific DNA binding Hs molecular function
inferior colliculus development Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 173 8.75e-52
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 210 1.08e-67
DNA binding Hs molecular function 210 1.08e-67
transcription factor activity, sequence-specific DNA binding Hs molecular function 210 1.08e-67
protein binding Hs molecular function 210 1.08e-67
nucleus Hs cellular component 210 1.08e-67
nucleoplasm Hs cellular component 173 8.75e-52
cytoplasm Hs cellular component 173 8.75e-52
transcription factor binding Hs molecular function 173 8.75e-52
protein domain specific binding Hs molecular function 173 8.75e-52
cell junction Hs cellular component 173 8.75e-52
sequence-specific DNA binding Hs molecular function 210 1.08e-67
transcription regulatory region DNA binding Hs molecular function 173 8.75e-52

GO (InterProScan)

3 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding SMART molecular function 6.6E-58
regulation of transcription, DNA-templated SMART biological process 6.6E-58
sequence-specific DNA binding SMART molecular function 6.6E-58