Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

BCL2L2-PABPN1; PABPN1; PABPN1L

Species

C.savignyi

Unique Gene ID

Cisavi.g00000920

Gene Model ID

Cisavi.CG.ENS81.R107.367870-376523

Location

R107:367869..376523

Transcript Models and Sequences

  Cisavi.CG.ENS81.R107.367870-376523.03420.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
PABP2 PANTHER Polyadenylate-binding protein 2
RRM_dom ProSiteProfiles RNA recognition motif domain
RRM_dom Pfam RNA recognition motif domain
RRM_dom SMART RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
cytoplasm Hs cellular component
mitochondrion Hs cellular component
mitochondrial outer membrane Hs cellular component
apoptotic process Hs biological process
spermatogenesis Hs biological process
intrinsic apoptotic signaling pathway in response to DNA damage Hs biological process
membrane Hs cellular component
mitochondrial membrane Hs cellular component
identical protein binding Hs molecular function
protein homodimerization activity Hs molecular function
regulation of apoptotic process Hs biological process
negative regulation of apoptotic process Hs biological process
protein heterodimerization activity Hs molecular function
extracellular exosome Hs cellular component
Bcl-2 family protein complex Hs cellular component
extrinsic apoptotic signaling pathway in absence of ligand Hs biological process
disordered domain specific binding Hs molecular function
negative regulation of intrinsic apoptotic signaling pathway Hs biological process
cytosol Hs cellular component
integral component of membrane Hs cellular component
BH domain binding Hs molecular function

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 208 1.92e-67
RNA binding Hs molecular function 208 1.92e-67
protein binding Hs molecular function 208 1.92e-67
nucleus Hs cellular component 207 1.44e-67
nucleoplasm Hs cellular component 207 1.44e-67
cytoplasm Hs cellular component 207 1.44e-67
mitochondrion Hs cellular component 208 1.92e-67
mitochondrial outer membrane Hs cellular component 208 1.92e-67
membrane Hs cellular component 208 1.92e-67
nuclear speck Hs cellular component 207 1.44e-67
intracellular ribonucleoprotein complex Hs cellular component 207 1.44e-67
mitochondrial membrane Hs cellular component 208 1.92e-67
nuclear inclusion body Hs cellular component 207 1.44e-67
identical protein binding Hs molecular function 208 1.92e-67
protein homodimerization activity Hs molecular function 208 1.92e-67
protein heterodimerization activity Hs molecular function 208 1.92e-67
extracellular exosome Hs cellular component 208 1.92e-67
RNA polymerase binding Hs molecular function 207 1.44e-67
Bcl-2 family protein complex Hs cellular component 208 1.92e-67
disordered domain specific binding Hs molecular function 208 1.92e-67

GO (InterProScan)

3 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 7.18E-30
RNA binding PANTHER molecular function 1.1E-83
positive regulation of polynucleotide adenylyltransferase activity PANTHER biological process 1.1E-83