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Regulatory Regions

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Gene Annotations

InterPro

20 results

IPR Term Analysis Definition
FERM_f0 Pfam Talin, N-terminal F0 domain
Vinculin-bd_dom Pfam Vinculin-binding site-containing domain
ILWEQ_dom SMART I/LWEQ domain
Alpha-catenin/vinculin-like_sf SUPERFAMILY Alpha-catenin/vinculin-like superfamily
FERM_N Pfam FERM, N-terminal
FERM_domain ProSiteProfiles FERM domain
I/LWEQ_dom_sf SUPERFAMILY I/LWEQ domain superfamily
FERM_2 SUPERFAMILY FERM superfamily, second domain
FERM/acyl-CoA-bd_prot_sf Gene3D FERM/acyl-CoA-binding protein superfamily
PH-like_dom_sf Gene3D PH-like domain superfamily
ILWEQ_dom ProDom I/LWEQ domain
Talin_cent Pfam Talin, central
ILWEQ_dom ProSiteProfiles I/LWEQ domain
FERM_central Pfam FERM central domain
ILWEQ_dom Pfam I/LWEQ domain
Band_41_domain SMART Band 4.1 domain
Talin_cent_sf SUPERFAMILY Talin, central domain superfamily
Talin1/2-RS CDD Talin-1/2, rod-segment
FERM_central CDD FERM central domain
Ubiquitin-like_domsf SUPERFAMILY Ubiquitin-like domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ruffle Hs cellular component
phosphatidylserine binding Hs molecular function
platelet degranulation Hs biological process
actin binding Hs molecular function
integrin binding Hs molecular function
structural molecule activity Hs molecular function
structural constituent of cytoskeleton Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
plasma membrane Hs cellular component
focal adhesion Hs cellular component
muscle contraction Hs biological process
cytoskeletal anchoring at plasma membrane Hs biological process
cell-cell junction assembly Hs biological process
cell-substrate junction assembly Hs biological process
cell adhesion Hs biological process
integrin-mediated signaling pathway Hs biological process
cell surface Hs cellular component
actin cytoskeleton Hs cellular component
membrane Hs cellular component
viral process Hs biological process
vinculin binding Hs molecular function
cell junction Hs cellular component
LIM domain binding Hs molecular function
cortical actin cytoskeleton organization Hs biological process
ruffle membrane Hs cellular component
phosphatidylinositol binding Hs molecular function
cell projection Hs cellular component
synapse Hs cellular component
cadherin binding Hs molecular function
actin filament binding Hs molecular function
extracellular exosome Hs cellular component
platelet aggregation Hs biological process

GO (Blast)

51 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ruffle Hs cellular component 2791 0.0
phosphatidylserine binding Hs molecular function 2719 0.0
actin binding Hs molecular function 2791 0.0
epidermal growth factor receptor binding Hs molecular function 100 9.07e-21
integrin binding Hs molecular function 2719 0.0
structural molecule activity Hs molecular function 2791 0.0
structural constituent of cytoskeleton Hs molecular function 2791 0.0
protein binding Hs molecular function 2791 0.0
phospholipid binding Hs molecular function 100 9.07e-21
extracellular region Hs cellular component 2719 0.0
nucleus Hs cellular component 100 9.07e-21
cytoplasm Hs cellular component 2791 0.0
Golgi apparatus Hs cellular component 100 9.07e-21
cytosol Hs cellular component 2719 0.0
cytoskeleton Hs cellular component 2791 0.0
plasma membrane Hs cellular component 2791 0.0
focal adhesion Hs cellular component 2791 0.0
cell surface Hs cellular component 2719 0.0
endomembrane system Hs cellular component 100 9.07e-21
actin cytoskeleton Hs cellular component 2791 0.0
membrane Hs cellular component 2791 0.0
vinculin binding Hs molecular function 2719 0.0
cell junction Hs cellular component 2791 0.0
AP-2 adaptor complex Hs cellular component 100 9.07e-21
clathrin-coated vesicle Hs cellular component 100 9.07e-21
LIM domain binding Hs molecular function 2719 0.0
clathrin binding Hs molecular function 100 9.07e-21
clathrin-coated vesicle membrane Hs cellular component 100 9.07e-21
extrinsic component of cytoplasmic side of plasma membrane Hs cellular component 100 9.07e-21
cytoplasmic vesicle Hs cellular component 100 9.07e-21
clathrin light chain binding Hs molecular function 100 9.07e-21
phosphatidylinositol-3-phosphate binding Hs molecular function 100 9.07e-21
ruffle membrane Hs cellular component 2719 0.0
phosphatidylinositol binding Hs molecular function 2719 0.0
glutamate receptor binding Hs molecular function 100 9.07e-21
AP-2 adaptor complex binding Hs molecular function 100 9.07e-21
clathrin adaptor activity Hs molecular function 100 9.07e-21
protein homodimerization activity Hs molecular function 100 9.07e-21
cell projection Hs cellular component 2719 0.0
intracellular membrane-bounded organelle Hs cellular component 100 9.07e-21
phosphatidylinositol-3,4-bisphosphate binding Hs molecular function 100 9.07e-21
synapse Hs cellular component 2791 0.0
cadherin binding Hs molecular function 2719 0.0
protein heterodimerization activity Hs molecular function 100 9.07e-21
actin filament binding Hs molecular function 2791 0.0
extracellular exosome Hs cellular component 2719 0.0
phosphatidylinositol-3,5-bisphosphate binding Hs molecular function 100 9.07e-21
presynapse Hs cellular component 100 9.07e-21
postsynapse Hs cellular component 100 9.07e-21
extrinsic component of presynaptic membrane Hs cellular component 100 9.07e-21
extrinsic component of postsynaptic membrane Hs cellular component 100 9.07e-21

GO (InterProScan)

8 results

GO Term Analysis Type e-value
ruffle Pfam cellular component 7.5E-49
actin binding Pfam molecular function 1.9E-36
structural constituent of cytoskeleton Pfam molecular function 7.5E-49
cytoskeleton ProSiteProfiles cellular component 55.871
focal adhesion Pfam cellular component 7.5E-49
cytoskeletal anchoring at plasma membrane Pfam biological process 7.5E-49
cell adhesion SUPERFAMILY biological process 3.92E-34
actin filament binding SUPERFAMILY molecular function 3.92E-34