Aniseed - Gene card

Gene 'Cisavi.CG.ENS81.R0.1...'

Gene Card

Best human hits

GBE1

Species

C.savignyi

Unique Gene ID

Cisavi.g00000023

Gene Model ID

Cisavi.CG.ENS81.R0.1129892-1149886

Location

R0:1129891..1149886

Transcript Models and Sequences

Cisavi.CG.ENS81.R0.1129892-1149886.13649.t
Cisavi.CG.ENS81.R0.1129892-1149886.13650.t
Cisavi.CG.ENS81.R0.1129892-1149886.13651.t
Cisavi.CG.ENS81.R0.1129892-1149886.13652.t
Cisavi.CG.ENS81.R0.1129892-1149886.13653.t
Cisavi.CG.ENS81.R0.1129892-1149886.13654.t
Cisavi.CG.ENS81.R0.1129892-1149886.13655.t
Cisavi.CG.ENS81.R0.1129892-1149886.13656.t
Cisavi.CG.ENS81.R0.1129892-1149886.13657.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
Glyco_hydro_b	Gene3D	Glycosyl hydrolase, all-beta
A-amylase/branching_C	Pfam	Alpha-amylase/branching enzyme, C-terminal all beta
Glyco_hydro_13_cat_dom	SMART	Glycosyl hydrolase, family 13, catalytic domain
Glyco_hydro_13_cat_dom	Pfam	Glycosyl hydrolase, family 13, catalytic domain
Ig_E-set	SUPERFAMILY	Immunoglobulin E-set
Branching_enzy	PIRSF	1,4-alpha-glucan-branching enzyme
Glycoside_hydrolase_SF	SUPERFAMILY	Glycoside hydrolase superfamily
Branching_enzy	PANTHER	1,4-alpha-glucan-branching enzyme
Ig-like_fold	Gene3D	Immunoglobulin-like fold
Glyco_hydro_13_N	Pfam	Glycoside hydrolase, family 13, N-terminal

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
catalytic activity	Hs	molecular function	686
1,4-alpha-glucan branching enzyme activity	Hs	molecular function	686
hydrolase activity, hydrolyzing O-glycosyl compounds	Hs	molecular function	686
protein binding	Hs	molecular function	686
cytosol	Hs	cellular component	686
transferase activity	Hs	molecular function	686
transferase activity, transferring glycosyl groups	Hs	molecular function	686
carbohydrate binding	Hs	molecular function	686
cation binding	Hs	molecular function	686
extracellular exosome	Hs	cellular component	686
1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)	Hs	molecular function	686

GO (InterProScan)

6 results

GO Term	Analysis	Type	e-value
catalytic activity	Pfam	molecular function	3.6E-4
1,4-alpha-glucan branching enzyme activity	PANTHER	molecular function	1.9E-259
hydrolase activity, hydrolyzing O-glycosyl compounds	Pfam	molecular function	8.4E-9
carbohydrate metabolic process	Pfam	biological process	3.6E-4
glycogen biosynthetic process	PANTHER	biological process	1.9E-259
cation binding	Pfam	molecular function	3.6E-4