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Gene Card

Best human hits

P4HA1; P4HA2; P4HA3

Species

B.schlosseri

Unique Gene ID

Boschl.g00070394

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g70394

Location

chrUn:399185120..399187707

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g70394.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Pro_4_hyd_alph SMART Prolyl 4-hydroxylase, alpha subunit
Oxoglu/Fe-dep_dioxygenase Pfam Oxoglutarate/iron-dependent dioxygenase
Oxoglu/Fe-dep_dioxygenase ProSiteProfiles Oxoglutarate/iron-dependent dioxygenase
TPR-like_helical_dom_sf Gene3D Tetratricopeptide-like helical domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
procollagen-proline 4-dioxygenase activity Hs molecular function
iron ion binding Hs molecular function
protein binding Hs molecular function
collagen trimer Hs cellular component
nucleoplasm Hs cellular component
mitochondrion Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum lumen Hs cellular component
cytosol Hs cellular component
electron carrier activity Hs molecular function
membrane Hs cellular component
procollagen-proline 4-dioxygenase complex Hs cellular component
oxidoreductase activity Hs molecular function
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Hs molecular function
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Hs molecular function
peptidyl-proline hydroxylation to 4-hydroxy-L-proline Hs biological process
peptidyl-proline hydroxylation Hs biological process
electron transport chain Hs biological process
collagen fibril organization Hs biological process
L-ascorbic acid binding Hs molecular function
identical protein binding Hs molecular function
intracellular membrane-bounded organelle Hs cellular component
metal ion binding Hs molecular function
dioxygenase activity Hs molecular function
oxidation-reduction process Hs biological process

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
procollagen-proline 4-dioxygenase activity Hs molecular function 323 2.77e-107
iron ion binding Hs molecular function 323 2.77e-107
protein binding Hs molecular function 323 2.77e-107
collagen trimer Hs cellular component 311 1.28e-102
nucleoplasm Hs cellular component 323 2.77e-107
mitochondrion Hs cellular component 311 1.28e-102
endoplasmic reticulum Hs cellular component 323 2.77e-107
endoplasmic reticulum lumen Hs cellular component 323 2.77e-107
cytosol Hs cellular component 323 2.77e-107
electron carrier activity Hs molecular function 323 2.77e-107
membrane Hs cellular component 311 1.28e-102
procollagen-proline 4-dioxygenase complex Hs cellular component 311 1.28e-102
oxidoreductase activity Hs molecular function 323 2.77e-107
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Hs molecular function 323 2.77e-107
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Hs molecular function 323 2.77e-107
L-ascorbic acid binding Hs molecular function 323 2.77e-107
identical protein binding Hs molecular function 311 1.28e-102
intracellular membrane-bounded organelle Hs cellular component 323 2.77e-107
metal ion binding Hs molecular function 323 2.77e-107
dioxygenase activity Hs molecular function 323 2.77e-107

GO (InterProScan)

6 results

GO Term Analysis Type e-value
iron ion binding SMART molecular function 3.7E-58
protein binding Gene3D molecular function 1.6E-9
oxidoreductase activity Pfam molecular function 2.4E-16
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen SMART molecular function 3.7E-58
L-ascorbic acid binding SMART molecular function 3.7E-58
oxidation-reduction process SMART biological process 3.7E-58

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