- Gene 'Boschl.CG.Botznik201...'
Gene Card
Best human hits
SRSF12; SRSF2; SRSF8
Species
Unique Gene ID
Boschl.g00067987
Gene Model ID
Boschl.CG.Botznik2013.chrUn.g67987
Location
chrUn:388182835..388183145
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| RRM_dom | Pfam | RNA recognition motif domain |
| RRM_dom | SMART | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
24 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| mitotic cell cycle | Hs | biological process |
| regulation of alternative mRNA splicing, via spliceosome | Hs | biological process |
| mRNA splicing, via spliceosome | Hs | biological process |
| nucleic acid binding | Hs | molecular function |
| transcription corepressor activity | Hs | molecular function |
| RNA binding | Hs | molecular function |
| protein kinase C binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| spliceosomal complex | Hs | cellular component |
| cytosol | Hs | cellular component |
| termination of RNA polymerase II transcription | Hs | biological process |
| mRNA processing | Hs | biological process |
| RNA export from nucleus | Hs | biological process |
| mRNA export from nucleus | Hs | biological process |
| RNA splicing | Hs | biological process |
| nuclear speck | Hs | cellular component |
| mRNA 3'-end processing | Hs | biological process |
| interchromatin granule | Hs | cellular component |
| pre-mRNA binding | Hs | molecular function |
| regulation of RNA splicing | Hs | biological process |
| extracellular exosome | Hs | cellular component |
| negative regulation of nucleic acid-templated transcription | Hs | biological process |
GO (Blast)
15 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 138 | 5.13e-43 |
| transcription corepressor activity | Hs | molecular function | 138 | 5.13e-43 |
| RNA binding | Hs | molecular function | 138 | 5.13e-43 |
| protein kinase C binding | Hs | molecular function | 138 | 5.13e-43 |
| protein binding | Hs | molecular function | 138 | 5.13e-43 |
| nucleus | Hs | cellular component | 138 | 5.13e-43 |
| nucleoplasm | Hs | cellular component | 138 | 5.13e-43 |
| spliceosomal complex | Hs | cellular component | 138 | 5.13e-43 |
| cytosol | Hs | cellular component | 138 | 5.13e-43 |
| nuclear speck | Hs | cellular component | 138 | 5.13e-43 |
| interchromatin granule | Hs | cellular component | 138 | 5.13e-43 |
| pre-mRNA binding | Hs | molecular function | 138 | 5.13e-43 |
| RS domain binding | Hs | molecular function | 72.0 | 7.42e-17 |
| unfolded protein binding | Hs | molecular function | 72.0 | 7.42e-17 |
| extracellular exosome | Hs | cellular component | 138 | 5.13e-43 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 2.15E-27 |
