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GENE CARD

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  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

COL12A1; COL6A3; COL6A6

Species

B.schlosseri

Unique Gene ID

Boschl.g00064710

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g64710

Location

chrUn:373366770..373381645

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g64710.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
VWF_A ProSiteProfiles von Willebrand factor, type A
VWF_A SMART von Willebrand factor, type A
VWF_type-D Pfam von Willebrand factor, type D domain
WxxW_domain Pfam WxxW domain
VWF_A Pfam von Willebrand factor, type A
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
CalX-like_sf SUPERFAMILY CalX-like domain superfamily
CalX-like_sf Gene3D CalX-like domain superfamily
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
serine-type endopeptidase inhibitor activity Hs molecular function 118 1.24e-26
protein binding Hs molecular function 118 1.24e-26
extracellular region Hs cellular component 118 1.24e-26
proteinaceous extracellular matrix Hs cellular component 118 1.24e-26
collagen trimer Hs cellular component 118 1.24e-26
collagen type VI trimer Hs cellular component 118 1.24e-26
collagen type XII trimer Hs cellular component 112 1.15e-24
extracellular space Hs cellular component 118 1.24e-26
endoplasmic reticulum lumen Hs cellular component 118 1.24e-26
extracellular matrix structural constituent conferring tensile strength Hs molecular function 112 1.15e-24
peptidase inhibitor activity Hs molecular function 118 1.24e-26
extracellular matrix Hs cellular component 118 1.24e-26
sarcolemma Hs cellular component 118 1.24e-26
extracellular exosome Hs cellular component 118 1.24e-26
extracellular vesicle Hs cellular component 118 1.24e-26

GO (InterProScan)

No result

GO Term Analysis Type e-value