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GENE CARD

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Gene Card

Best human hits

NEB; NEBL; NRAP

Species

B.schlosseri

Unique Gene ID

Boschl.g00056909

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g56909

Location

chrUn:338716398..338721811

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g56909.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Nebulin_repeat ProSiteProfiles Nebulin repeat
Nebulin_repeat Pfam Nebulin repeat
Nebulin_repeat SMART Nebulin repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
stress fiber Hs cellular component 45.8 2.99e-05
actin binding Hs molecular function 62.4 1.79e-10
protein binding Hs molecular function 62.4 1.79e-10
tropomyosin binding Hs molecular function 45.8 2.99e-05
cytoplasm Hs cellular component 62.4 1.79e-10
cytosol Hs cellular component 62.4 1.79e-10
cytoskeleton Hs cellular component 62.4 1.79e-10
fascia adherens Hs cellular component 51.2 6.16e-07
muscle tendon junction Hs cellular component 51.2 6.16e-07
cytoskeletal protein binding Hs molecular function 45.8 2.99e-05
structural constituent of muscle Hs molecular function 62.4 1.79e-10
actin cytoskeleton Hs cellular component 62.4 1.79e-10
vinculin binding Hs molecular function 51.2 6.16e-07
myofibril Hs cellular component 62.4 1.79e-10
sarcomere Hs cellular component 62.4 1.79e-10
Z disc Hs cellular component 62.4 1.79e-10
filamin binding Hs molecular function 45.8 2.99e-05
I band Hs cellular component 45.8 2.99e-05
contractile fiber Hs cellular component 62.4 1.79e-10
metal ion binding Hs molecular function 51.2 6.16e-07
actin filament binding Hs molecular function 45.8 2.99e-05
muscle alpha-actinin binding Hs molecular function 51.2 6.16e-07
extracellular exosome Hs cellular component 62.4 1.79e-10

GO (InterProScan)

No result

GO Term Analysis Type e-value