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GENE CARD

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  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

AFG3L2; SPG7; YME1L1

Species

B.schlosseri

Unique Gene ID

Boschl.g00053893

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g53893

Location

chrUn:328093023..328095003

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g53893.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Peptidase_M41 Pfam Peptidase M41
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
FtsH TIGRFAM Peptidase, FtsH
Peptidase_M41-like SUPERFAMILY Peptidase M41-like
AAA+_ATPase SMART AAA+ ATPase domain
ATPase_AAA_core Pfam ATPase, AAA-type, core

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
metalloendopeptidase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
mitochondrion Hs cellular component
mitochondrial inner membrane Hs cellular component
m-AAA complex Hs cellular component
mitochondrial permeability transition pore complex Hs cellular component
proteolysis Hs biological process
mitochondrial calcium ion transmembrane transport Hs biological process
mitochondrion organization Hs biological process
nervous system development Hs biological process
anterograde axonal transport Hs biological process
peptidase activity Hs molecular function
metallopeptidase activity Hs molecular function
zinc ion binding Hs molecular function
membrane Hs cellular component
integral component of membrane Hs cellular component
hydrolase activity Hs molecular function
metal ion binding Hs molecular function
regulation of mitochondrial membrane permeability Hs biological process
unfolded protein binding Hs molecular function
axon cytoplasm Hs cellular component

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 543 0.0
ATP-dependent peptidase activity Hs molecular function 277 5.26e-83
metalloendopeptidase activity Hs molecular function 543 0.0
protein binding Hs molecular function 543 0.0
ATP binding Hs molecular function 543 0.0
mitochondrion Hs cellular component 543 0.0
mitochondrial inner membrane Hs cellular component 543 0.0
m-AAA complex Hs cellular component 543 0.0
mitochondrial permeability transition pore complex Hs cellular component 543 0.0
peptidase activity Hs molecular function 543 0.0
metallopeptidase activity Hs molecular function 543 0.0
zinc ion binding Hs molecular function 543 0.0
membrane Hs cellular component 543 0.0
integral component of membrane Hs cellular component 543 0.0
nuclear body Hs cellular component 277 5.26e-83
hydrolase activity Hs molecular function 543 0.0
metal ion binding Hs molecular function 543 0.0
unfolded protein binding Hs molecular function 543 0.0
axon cytoplasm Hs cellular component 543 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
metalloendopeptidase activity TIGRFAM molecular function 7.9E-169
ATP binding Pfam molecular function 6.5E-56
proteolysis Pfam biological process 6.5E-56
membrane TIGRFAM cellular component 7.9E-169