Login
Help

GENE CARD

Submit your Data

  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

ASPSCR1; NGLY1; UBXN6

Species

B.schlosseri

Unique Gene ID

Boschl.g00049282

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g49282

Location

chrUn:305204800..305206054

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g49282.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
PUB-like_dom_sf SUPERFAMILY PUB-like domain superfamily
Ubiquitin-like_domsf SUPERFAMILY Ubiquitin-like domain superfamily
UBX_dom ProSiteProfiles UBX domain
UBX_dom Pfam UBX domain
PUB_domain SMART PUB domain
PUB_domain Pfam PUB domain
UBX_dom SMART UBX domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
lysosome Hs cellular component
lysosomal membrane Hs cellular component
endosome Hs cellular component
microtubule organizing center Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
membrane Hs cellular component
macroautophagy Hs biological process
extrinsic component of membrane Hs cellular component
early endosome membrane Hs cellular component
late endosome membrane Hs cellular component
endosome to lysosome transport via multivesicular body sorting pathway Hs biological process
macromolecular complex Hs cellular component
ERAD pathway Hs biological process
extracellular exosome Hs cellular component

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity Hs molecular function 53.9 1.05e-07
protein binding Hs molecular function 221 8.60e-68
nucleus Hs cellular component 221 8.60e-68
nucleoplasm Hs cellular component 50.4 1.31e-06
cytoplasm Hs cellular component 221 8.60e-68
lysosome Hs cellular component 221 8.60e-68
lysosomal membrane Hs cellular component 221 8.60e-68
endosome Hs cellular component 221 8.60e-68
microtubule organizing center Hs cellular component 221 8.60e-68
cytosol Hs cellular component 221 8.60e-68
cytoskeleton Hs cellular component 221 8.60e-68
plasma membrane Hs cellular component 50.4 1.31e-06
cytoplasmic side of plasma membrane Hs cellular component 50.4 1.31e-06
endomembrane system Hs cellular component 50.4 1.31e-06
vesicle membrane Hs cellular component 50.4 1.31e-06
membrane Hs cellular component 221 8.60e-68
hydrolase activity Hs molecular function 53.9 1.05e-07
extrinsic component of membrane Hs cellular component 221 8.60e-68
early endosome membrane Hs cellular component 221 8.60e-68
late endosome membrane Hs cellular component 221 8.60e-68
macromolecular complex Hs cellular component 221 8.60e-68
endoplasmic reticulum-Golgi intermediate compartment membrane Hs cellular component 50.4 1.31e-06
intracellular membrane-bounded organelle Hs cellular component 50.4 1.31e-06
metal ion binding Hs molecular function 53.9 1.05e-07
perinuclear region of cytoplasm Hs cellular component 50.4 1.31e-06
extracellular exosome Hs cellular component 221 8.60e-68

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 1.2E-6