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GENE CARD

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  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

TMTC1; TMTC3; TMTC4

Species

B.schlosseri

Unique Gene ID

Boschl.g00039904

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g39904

Location

chrUn:263059315..263061583

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g39904.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
TPR-like_helical_dom_sf SUPERFAMILY Tetratricopeptide-like helical domain superfamily
TPR-like_helical_dom_sf Gene3D Tetratricopeptide-like helical domain superfamily
TPR_repeat ProSiteProfiles Tetratricopeptide repeat
TPR_repeat Pfam Tetratricopeptide repeat
TPR-contain_dom ProSiteProfiles Tetratricopeptide repeat-containing domain
DUF1736 Pfam Domain of unknown function DUF1736
TPR_repeat SMART Tetratricopeptide repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

6 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
endoplasmic reticulum Hs cellular component
membrane Hs cellular component
integral component of membrane Hs cellular component
response to endoplasmic reticulum stress Hs biological process
positive regulation of proteasomal protein catabolic process Hs biological process

GO (Blast)

5 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 508 3.98e-168
mitochondrion Hs cellular component 271 1.40e-78
endoplasmic reticulum Hs cellular component 508 3.98e-168
membrane Hs cellular component 508 3.98e-168
integral component of membrane Hs cellular component 508 3.98e-168

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 3.03E-38