Aniseed - Gene card

Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

NFX1

Species

B.schlosseri

Unique Gene ID

Boschl.g00037342

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g37342

Location

chrUn:245096269..245097328

Transcript Models and Sequences

Boschl.CG.Botznik2013.chrUn.g37342.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
NFX1_fam	PANTHER	Transcription factor NFX1 family
R3H_dom_sf	Gene3D	R3H domain superfamily
R3H_dom_sf	SUPERFAMILY	R3H domain superfamily
R3H_dom	ProSiteProfiles	R3H domain
R3H_dom	SMART	R3H domain
R3H_dom	Pfam	R3H domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
RNA binding	Hs	molecular function
nucleus	Hs	cellular component
nucleolus	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
inflammatory response	Hs	biological process
zinc ion binding	Hs	molecular function
viral process	Hs	biological process
transferase activity	Hs	molecular function
metal ion binding	Hs	molecular function

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	166	2.35e-45
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	166	2.35e-45
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	166	2.35e-45
nucleic acid binding	Hs	molecular function	166	2.35e-45
DNA binding	Hs	molecular function	166	2.35e-45
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	166	2.35e-45
RNA binding	Hs	molecular function	166	2.35e-45
nucleus	Hs	cellular component	166	2.35e-45
nucleolus	Hs	cellular component	166	2.35e-45
cytosol	Hs	cellular component	166	2.35e-45
plasma membrane	Hs	cellular component	166	2.35e-45
zinc ion binding	Hs	molecular function	166	2.35e-45
transferase activity	Hs	molecular function	166	2.35e-45
metal ion binding	Hs	molecular function	166	2.35e-45

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	1.4E-17
transcription factor activity, sequence-specific DNA binding	PANTHER	molecular function	8.2E-59