- Gene 'Boschl.CG.Botznik201...'
Gene Card
Best human hits
KHDRBS2; QKI; SF1
Species
Unique Gene ID
Boschl.g00037239
Gene Model ID
Boschl.CG.Botznik2013.chrUn.g37239
Location
chrUn:244392424..244395861
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| KH_dom_type_1_sf | SUPERFAMILY | K Homology domain, type 1 superfamily |
| KH_dom | SMART | K Homology domain |
| BBP/SF1 | PANTHER | BBP/SF1 family |
| KH_dom_type_1_sf | Gene3D | K Homology domain, type 1 superfamily |
| KH_dom_type_1 | Pfam | K Homology domain, type 1 |
| SF1-HH | Pfam | Splicing factor 1, helix-hairpin domain |
| GO Term | Annotation Origin | Type |
|---|
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 304 | 1.36e-98 |
| transcription corepressor activity | Hs | molecular function | 304 | 1.36e-98 |
| RNA binding | Hs | molecular function | 304 | 1.36e-98 |
| mRNA binding | Hs | molecular function | 73.2 | 1.68e-14 |
| protein binding | Hs | molecular function | 304 | 1.36e-98 |
| nucleus | Hs | cellular component | 304 | 1.36e-98 |
| nucleoplasm | Hs | cellular component | 304 | 1.36e-98 |
| spliceosomal complex | Hs | cellular component | 304 | 1.36e-98 |
| cytoplasm | Hs | cellular component | 73.2 | 1.68e-14 |
| ribosome | Hs | cellular component | 304 | 1.36e-98 |
| poly(A) binding | Hs | molecular function | 60.8 | 1.94e-10 |
| poly(U) RNA binding | Hs | molecular function | 60.8 | 1.94e-10 |
| zinc ion binding | Hs | molecular function | 304 | 1.36e-98 |
| nuclear body | Hs | cellular component | 304 | 1.36e-98 |
| SH3 domain binding | Hs | molecular function | 73.2 | 1.68e-14 |
| SH2 domain binding | Hs | molecular function | 60.8 | 1.94e-10 |
| identical protein binding | Hs | molecular function | 304 | 1.36e-98 |
| pre-mRNA branch point binding | Hs | molecular function | 304 | 1.36e-98 |
| metal ion binding | Hs | molecular function | 304 | 1.36e-98 |
| protein heterodimerization activity | Hs | molecular function | 60.8 | 1.94e-10 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| mRNA splicing, via spliceosome | PANTHER | biological process | 4.8E-101 |
| nucleic acid binding | SMART | molecular function | 6.8E-13 |
| RNA binding | PANTHER | molecular function | 4.8E-101 |
| pre-mRNA branch point binding | PANTHER | molecular function | 4.8E-101 |
