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GENE CARD

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  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

DDX24; DDX47

Species

B.schlosseri

Unique Gene ID

Boschl.g00036046

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g36046

Location

chrUn:235885328..235887814

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g36046.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Helicase_C Pfam Helicase, C-terminal
Helicase_C CDD Helicase, C-terminal
Helicase_C SMART Helicase, C-terminal
Helicase_C ProSiteProfiles Helicase, C-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
RNA helicase activity Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleolus Hs cellular component
cytoplasm Hs cellular component
RNA secondary structure unwinding Hs biological process
membrane Hs cellular component
RNA metabolic process Hs biological process
hydrolase activity Hs molecular function

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 293 3.90e-92
nucleic acid binding Hs molecular function 293 3.90e-92
RNA binding Hs molecular function 293 3.90e-92
RNA helicase activity Hs molecular function 293 3.90e-92
ATP-dependent RNA helicase activity Hs molecular function 293 3.90e-92
helicase activity Hs molecular function 293 3.90e-92
protein binding Hs molecular function 293 3.90e-92
ATP binding Hs molecular function 293 3.90e-92
nucleus Hs cellular component 100 2.58e-23
nucleoplasm Hs cellular component 100 2.58e-23
nucleolus Hs cellular component 293 3.90e-92
cytoplasm Hs cellular component 293 3.90e-92
membrane Hs cellular component 293 3.90e-92
hydrolase activity Hs molecular function 293 3.90e-92

GO (InterProScan)

No result

GO Term Analysis Type e-value