Login
Help

GENE CARD

Submit your Data

  1. > 
  2. > 
  3. > 

Gene Card

Best human hits

ARNT; ARNT2; ARNTL

Species

B.schlosseri

Unique Gene ID

Boschl.g00035561

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g35561

Location

chrUn:232447416..232449114

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g35561.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
PAS CDD PAS domain
PAS SMART PAS domain
bHLH_dom Pfam Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom CDD Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain
PAS_fold Pfam PAS fold
PAS-like_dom_sf SUPERFAMILY PAS domain superfamily
PAS ProSiteProfiles PAS domain
Nuc_translocat PRINTS Nuclear translocator
HLH_DNA-bd_sf SUPERFAMILY Helix-loop-helix DNA-binding domain superfamily
PAS TIGRFAM PAS domain
HLH_DNA-bd_sf Gene3D Helix-loop-helix DNA-binding domain superfamily
bHLH_dom SMART Myc-type, basic helix-loop-helix (bHLH) domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

40 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription factor activity, transcription factor binding Hs molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
response to hypoxia Hs biological process
positive regulation of endothelial cell proliferation Hs biological process
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function
transcription coactivator activity Hs molecular function
aryl hydrocarbon receptor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
xenobiotic metabolic process Hs biological process
central nervous system development Hs biological process
brain development Hs biological process
transcription factor binding Hs molecular function
positive regulation of cell proliferation Hs biological process
positive regulation of vascular endothelial growth factor production Hs biological process
nuclear body Hs cellular component
aryl hydrocarbon receptor binding Hs molecular function
cell differentiation Hs biological process
intracellular receptor signaling pathway Hs biological process
response to estradiol Hs biological process
enhancer binding Hs molecular function
mRNA transcription from RNA polymerase II promoter Hs biological process
negative regulation of apoptotic process Hs biological process
sequence-specific DNA binding Hs molecular function
positive regulation of erythrocyte differentiation Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
protein heterodimerization activity Hs molecular function
protein dimerization activity Hs molecular function
RNA polymerase II transcription factor complex Hs cellular component

GO (Blast)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
transcription regulatory region sequence-specific DNA binding Hs molecular function 313 6.72e-99
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 478 4.78e-162
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 485 8.84e-164
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 313 6.72e-99
transcription factor activity, transcription factor binding Hs molecular function 485 8.84e-164
core promoter sequence-specific DNA binding Hs molecular function 313 6.72e-99
core promoter binding Hs molecular function 313 6.72e-99
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 478 4.78e-162
transcriptional activator activity, RNA polymerase II transcription factor binding Hs molecular function 313 6.72e-99
DNA binding Hs molecular function 485 8.84e-164
transcription factor activity, sequence-specific DNA binding Hs molecular function 485 8.84e-164
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 485 8.84e-164
transcription coactivator activity Hs molecular function 485 8.84e-164
aryl hydrocarbon receptor activity Hs molecular function 485 8.84e-164
protein binding Hs molecular function 485 8.84e-164
nucleus Hs cellular component 485 8.84e-164
nucleoplasm Hs cellular component 485 8.84e-164
transcription factor complex Hs cellular component 485 8.84e-164
cytoplasm Hs cellular component 485 8.84e-164
transcription factor binding Hs molecular function 485 8.84e-164
nuclear body Hs cellular component 485 8.84e-164
PML body Hs cellular component 313 6.72e-99
aryl hydrocarbon receptor binding Hs molecular function 485 8.84e-164
chromatoid body Hs cellular component 313 6.72e-99
enhancer binding Hs molecular function 485 8.84e-164
intracellular membrane-bounded organelle Hs cellular component 313 6.72e-99
bHLH transcription factor binding Hs molecular function 313 6.72e-99
sequence-specific DNA binding Hs molecular function 485 8.84e-164
protein heterodimerization activity Hs molecular function 485 8.84e-164
protein dimerization activity Hs molecular function 485 8.84e-164
Hsp90 protein binding Hs molecular function 313 6.72e-99
repressing transcription factor binding Hs molecular function 313 6.72e-99
E-box binding Hs molecular function 313 6.72e-99
RNA polymerase II transcription factor complex Hs cellular component 485 8.84e-164

GO (InterProScan)

6 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding PRINTS molecular function 2.2E-73
nucleus PRINTS cellular component 2.2E-73
transcription factor complex PRINTS cellular component 2.2E-73
cytoplasm PRINTS cellular component 2.2E-73
regulation of transcription, DNA-templated PRINTS biological process 2.2E-73
protein dimerization activity Gene3D molecular function 1.2E-21

Back to Top