Aniseed - Gene card

Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

GRB10; GRB14; GRB7

Species

B.schlosseri

Unique Gene ID

Boschl.g00035054

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g35054

Location

chrUn:229111045..229113605

Transcript Models and Sequences

Boschl.CG.Botznik2013.chrUn.g35054.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
SH2	Pfam	SH2 domain
SH2	SMART	SH2 domain
BPS-dom	Pfam	BPS (Between PH and SH2) domain
Grb7	PANTHER	Growth factor receptor-bound protein 7
SH2	ProSiteProfiles	SH2 domain
SH2	PRINTS	SH2 domain
SH2_dom_sf	SUPERFAMILY	SH2 domain superfamily
SH2_dom_sf	Gene3D	SH2 domain superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

34 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA binding	Hs	molecular function
SH3/SH2 adaptor activity	Hs	molecular function
insulin receptor binding	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
endosome	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
focal adhesion	Hs	cellular component
signal transduction	Hs	biological process
epidermal growth factor receptor signaling pathway	Hs	biological process
axon guidance	Hs	biological process
lipid binding	Hs	molecular function
positive regulation of signal transduction	Hs	biological process
endosome membrane	Hs	cellular component
cytoplasmic stress granule	Hs	cellular component
membrane	Hs	cellular component
negative regulation of translation	Hs	biological process
protein kinase binding	Hs	molecular function
cell junction	Hs	cellular component
negative regulation of Wnt signaling pathway	Hs	biological process
positive regulation of cell migration	Hs	biological process
receptor tyrosine kinase binding	Hs	molecular function
macromolecular complex	Hs	cellular component
stress granule assembly	Hs	biological process
phosphatidylinositol binding	Hs	molecular function
negative regulation of phosphorylation	Hs	biological process
identical protein binding	Hs	molecular function
protein homodimerization activity	Hs	molecular function
cell projection	Hs	cellular component
intracellular membrane-bounded organelle	Hs	cellular component
negative regulation of insulin receptor signaling pathway	Hs	biological process
insulin-like growth factor receptor signaling pathway	Hs	biological process
leukocyte migration	Hs	biological process

GO (Blast)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	151	1.55e-43
SH3/SH2 adaptor activity	Hs	molecular function	161	5.49e-47
insulin receptor binding	Hs	molecular function	161	5.49e-47
protein binding	Hs	molecular function	161	5.49e-47
cytoplasm	Hs	cellular component	161	5.49e-47
endosome	Hs	cellular component	149	1.09e-42
cytosol	Hs	cellular component	161	5.49e-47
plasma membrane	Hs	cellular component	161	5.49e-47
focal adhesion	Hs	cellular component	151	1.55e-43
lipid binding	Hs	molecular function	151	1.55e-43
endosome membrane	Hs	cellular component	149	1.09e-42
cytoplasmic stress granule	Hs	cellular component	151	1.55e-43
membrane	Hs	cellular component	151	1.55e-43
protein kinase binding	Hs	molecular function	151	1.55e-43
cell junction	Hs	cellular component	151	1.55e-43
receptor tyrosine kinase binding	Hs	molecular function	149	1.09e-42
macromolecular complex	Hs	cellular component	161	5.49e-47
phosphatidylinositol binding	Hs	molecular function	151	1.55e-43
identical protein binding	Hs	molecular function	151	1.55e-43
protein homodimerization activity	Hs	molecular function	149	1.09e-42
cell projection	Hs	cellular component	151	1.55e-43
intracellular membrane-bounded organelle	Hs	cellular component	149	1.09e-42

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
SH3/SH2 adaptor activity	PANTHER	molecular function	6.9E-53
signal transduction	PANTHER	biological process	6.9E-53