- Gene 'Boschl.CG.Botznik201...'
Gene Card
Best human hits
MCM3AP; PRPF4; RBM26
Species
Unique Gene ID
Boschl.g00029051
Gene Model ID
Boschl.CG.Botznik2013.chrUn.g29051
Location
chrUn:190641573..190644511
Transcript Models and Sequences
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| RRM_dom | Pfam | RNA recognition motif domain |
| PRP4-like | Pfam | Pre-mRNA processing factor 4 (PRP4)-like |
| PRP4-like_sf | SUPERFAMILY | PRP4-like superfamily |
| Prp4 | PANTHER | U4/U6 small nuclear ribonucleoprotein Prp4 |
| PRP4-like_sf | Gene3D | PRP4-like superfamily |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| PRP4-like | SMART | Pre-mRNA processing factor 4 (PRP4)-like |
| GO Term | Annotation Origin | Type |
|---|
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
22 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 52.8 | 5.22e-07 |
| DNA binding | Hs | molecular function | 52.8 | 5.22e-07 |
| RNA binding | Hs | molecular function | 43.1 | 4.39e-04 |
| protein binding | Hs | molecular function | 177 | 1.11e-48 |
| nucleus | Hs | cellular component | 177 | 1.11e-48 |
| nuclear envelope | Hs | cellular component | 52.8 | 5.22e-07 |
| nuclear pore | Hs | cellular component | 52.8 | 5.22e-07 |
| nucleoplasm | Hs | cellular component | 177 | 1.11e-48 |
| spliceosomal complex | Hs | cellular component | 177 | 1.11e-48 |
| cytoplasm | Hs | cellular component | 52.8 | 5.22e-07 |
| cytosol | Hs | cellular component | 52.8 | 5.22e-07 |
| Cajal body | Hs | cellular component | 177 | 1.11e-48 |
| nuclear speck | Hs | cellular component | 177 | 1.11e-48 |
| transferase activity | Hs | molecular function | 52.8 | 5.22e-07 |
| transferase activity, transferring acyl groups | Hs | molecular function | 52.8 | 5.22e-07 |
| U6 snRNA binding | Hs | molecular function | 177 | 1.11e-48 |
| U4 snRNA binding | Hs | molecular function | 177 | 1.11e-48 |
| nuclear membrane | Hs | cellular component | 52.8 | 5.22e-07 |
| U4/U6 x U5 tri-snRNP complex | Hs | cellular component | 177 | 1.11e-48 |
| metal ion binding | Hs | molecular function | 43.1 | 4.39e-04 |
| U4/U6 snRNP | Hs | cellular component | 177 | 1.11e-48 |
| spliceosomal snRNP complex | Hs | cellular component | 177 | 1.11e-48 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 2.99E-10 |
