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GENE CARD

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Gene Card

Best human hits

XRCC5

Species

B.schlosseri

Unique Gene ID

Boschl.g00022659

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g22659

Location

chrUn:147936414..147940921

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g22659.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Ku70/Ku80_beta-barrel_dom Pfam Ku70/Ku80 beta-barrel domain
Ku80 PANTHER Ku80
SPOC-like_C_dom_sf SUPERFAMILY SPOC-like, C-terminal domain superfamily
SPOC-like_C_dom_sf Gene3D SPOC-like, C-terminal domain superfamily
Ku70/Ku80_beta-barrel_dom SMART Ku70/Ku80 beta-barrel domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
extracellular region Hs cellular component
plasma membrane Hs cellular component
membrane Hs cellular component
memory Hs biological process
visual learning Hs biological process
postsynaptic density Hs cellular component
integral component of membrane Hs cellular component
cell junction Hs cellular component
ionotropic glutamate receptor binding Hs molecular function
synapse Hs cellular component
postsynaptic membrane Hs cellular component
regulation of neuronal synaptic plasticity Hs biological process
regulation of long-term neuronal synaptic plasticity Hs biological process
excitatory synapse Hs cellular component
receptor localization to synapse Hs biological process
postsynaptic density membrane Hs cellular component
regulation of kainate selective glutamate receptor activity Hs biological process

GO (Blast)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 151 6.81e-41
nuclear telomere cap complex Hs cellular component 151 6.81e-41
nuclear chromosome, telomeric region Hs cellular component 151 6.81e-41
DNA binding Hs molecular function 151 6.81e-41
damaged DNA binding Hs molecular function 151 6.81e-41
double-stranded DNA binding Hs molecular function 151 6.81e-41
double-stranded telomeric DNA binding Hs molecular function 151 6.81e-41
RNA binding Hs molecular function 151 6.81e-41
ATP-dependent DNA helicase activity Hs molecular function 151 6.81e-41
helicase activity Hs molecular function 151 6.81e-41
protein binding Hs molecular function 151 6.81e-41
ATP binding Hs molecular function 151 6.81e-41
extracellular region Hs cellular component 151 6.81e-41
nucleus Hs cellular component 151 6.81e-41
nucleoplasm Hs cellular component 151 6.81e-41
chromosome Hs cellular component 151 6.81e-41
nucleolus Hs cellular component 151 6.81e-41
cytoplasm Hs cellular component 151 6.81e-41
cytosol Hs cellular component 151 6.81e-41
plasma membrane Hs cellular component 151 6.81e-41
protein C-terminus binding Hs molecular function 151 6.81e-41
enzyme activator activity Hs molecular function 151 6.81e-41
membrane Hs cellular component 151 6.81e-41
hydrolase activity Hs molecular function 151 6.81e-41
hydrolase activity, acting on acid anhydrides Hs molecular function 151 6.81e-41
intracellular ribonucleoprotein complex Hs cellular component 151 6.81e-41
ubiquitin protein ligase binding Hs molecular function 151 6.81e-41
macromolecular complex Hs cellular component 151 6.81e-41
protein-DNA complex Hs cellular component 151 6.81e-41
secretory granule lumen Hs cellular component 151 6.81e-41
telomeric DNA binding Hs molecular function 151 6.81e-41
Ku70:Ku80 complex Hs cellular component 151 6.81e-41
transcription regulatory region DNA binding Hs molecular function 151 6.81e-41
macromolecular complex binding Hs molecular function 151 6.81e-41
5'-deoxyribose-5-phosphate lyase activity Hs molecular function 151 6.81e-41
nonhomologous end joining complex Hs cellular component 151 6.81e-41

GO (InterProScan)

8 results

GO Term Analysis Type e-value
telomere maintenance PANTHER biological process 5.1E-59
DNA binding PANTHER molecular function 5.1E-59
damaged DNA binding PANTHER molecular function 5.1E-59
nucleus PANTHER cellular component 5.1E-59
double-strand break repair via nonhomologous end joining PANTHER biological process 5.1E-59
DNA recombination PANTHER biological process 5.1E-59
telomeric DNA binding PANTHER molecular function 5.1E-59
Ku70:Ku80 complex PANTHER cellular component 5.1E-59