Aniseed - Gene card

Gene Card

Best human hits

KLHL20; KLHL28; KLHL3

Species

B.schlosseri

Unique Gene ID

Boschl.g00020162

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g20162

Location

chrUn:130950034..130958425

Transcript Models and Sequences

Boschl.CG.Botznik2013.chrUn.g20162.01.t
Boschl.CG.Botznik2013.chrUn.g20162.02.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
BACK	SMART	BTB/Kelch-associated
BTB/POZ_dom	SMART	BTB/POZ domain
BACK	Pfam	BTB/Kelch-associated
SKP1/BTB/POZ_sf	SUPERFAMILY	SKP1/BTB/POZ domain superfamily
BTB/POZ_dom	ProSiteProfiles	BTB/POZ domain
BTB/POZ_dom	Pfam	BTB/POZ domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

44 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Hs	biological process
nuclear-transcribed mRNA poly(A) tail shortening	Hs	biological process
RNA cap binding	Hs	molecular function
cap-dependent translational initiation	Hs	biological process
RNA binding	Hs	molecular function
mRNA binding	Hs	molecular function
translation initiation factor activity	Hs	molecular function
binding	Hs	molecular function
ATP binding	Hs	molecular function
polysome	Hs	cellular component
translation	Hs	biological process
translational initiation	Hs	biological process
regulation of translation	Hs	biological process
regulation of translational initiation	Hs	biological process
mitochondrion organization	Hs	biological process
translation factor activity, RNA binding	Hs	molecular function
eukaryotic initiation factor 4E binding	Hs	molecular function
positive regulation of cell proliferation	Hs	biological process
negative regulation of autophagy	Hs	biological process
positive regulation of cell death	Hs	biological process
membrane	Hs	cellular component
viral process	Hs	biological process
eukaryotic translation initiation factor 4F complex	Hs	cellular component
cytosolic small ribosomal subunit	Hs	cellular component
positive regulation of cell growth	Hs	biological process
translation initiation factor binding	Hs	molecular function
cellular response to nutrient levels	Hs	biological process
developmental process	Hs	biological process
protein complex scaffold activity	Hs	molecular function
positive regulation of peptidyl-serine phosphorylation	Hs	biological process
identical protein binding	Hs	molecular function
regulation of mRNA stability	Hs	biological process
cadherin binding	Hs	molecular function
positive regulation of neuron differentiation	Hs	biological process
regulation of gene silencing by miRNA	Hs	biological process
regulation of cellular response to stress	Hs	biological process
energy homeostasis	Hs	biological process
positive regulation of G1/S transition of mitotic cell cycle	Hs	biological process
negative regulation of neuron death	Hs	biological process
regulation of presynapse assembly	Hs	biological process

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
actin binding	Hs	molecular function	117	4.34e-27
ubiquitin-protein transferase activity	Hs	molecular function	117	4.34e-27
structural molecule activity	Hs	molecular function	106	1.07e-23
protein binding	Hs	molecular function	117	4.34e-27
nucleus	Hs	cellular component	117	4.34e-27
cytoplasm	Hs	cellular component	117	4.34e-27
Golgi apparatus	Hs	cellular component	117	4.34e-27
trans-Golgi network	Hs	cellular component	117	4.34e-27
cytosol	Hs	cellular component	117	4.34e-27
cytoskeleton	Hs	cellular component	106	1.07e-23
actin cytoskeleton	Hs	cellular component	117	4.34e-27
PML body	Hs	cellular component	117	4.34e-27
interferon-gamma binding	Hs	molecular function	117	4.34e-27
axon	Hs	cellular component	117	4.34e-27
dendrite	Hs	cellular component	117	4.34e-27
Cul3-RING ubiquitin ligase complex	Hs	cellular component	117	4.34e-27
cell projection	Hs	cellular component	117	4.34e-27
perinuclear region of cytoplasm	Hs	cellular component	117	4.34e-27

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	Pfam	molecular function	2.2E-22