Aniseed - Gene card

Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

MYT1; MYT1L

Species

B.schlosseri

Unique Gene ID

Boschl.g00019122

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g19122

Location

chrUn:124088549..124089636

Transcript Models and Sequences

Boschl.CG.Botznik2013.chrUn.g19122.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Znf_C2HC_sf	SUPERFAMILY	Zinc finger, C2HC-type superfamily
Znf_C2HC	ProSiteProfiles	Zinc finger, C2HC-type
Znf_C2HC	Pfam	Zinc finger, C2HC-type

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
chromosome	Hs	cellular component
cytosol	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
nervous system development	Hs	biological process
zinc ion binding	Hs	molecular function
cell differentiation	Hs	biological process
neuron differentiation	Hs	biological process
metal ion binding	Hs	molecular function
neuron fate commitment	Hs	biological process
neuron fate specification	Hs	biological process
neuron development	Hs	biological process
core promoter binding	Hs	molecular function
negative regulation of cell proliferation	Hs	biological process
protein-DNA complex	Hs	cellular component
tumor necrosis factor-mediated signaling pathway	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
interleukin-1-mediated signaling pathway	Hs	biological process
positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway	Hs	biological process

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	126	9.36e-33
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	126	9.36e-33
DNA binding	Hs	molecular function	126	9.36e-33
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	126	9.36e-33
protein binding	Hs	molecular function	124	4.50e-32
nucleus	Hs	cellular component	126	9.36e-33
nucleoplasm	Hs	cellular component	124	4.50e-32
chromosome	Hs	cellular component	126	9.36e-33
cytosol	Hs	cellular component	124	4.50e-32
zinc ion binding	Hs	molecular function	126	9.36e-33
metal ion binding	Hs	molecular function	126	9.36e-33

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	SUPERFAMILY	molecular function	1.16E-13
nucleus	SUPERFAMILY	cellular component	1.16E-13
regulation of transcription, DNA-templated	SUPERFAMILY	biological process	1.16E-13
zinc ion binding	SUPERFAMILY	molecular function	1.16E-13