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GENE CARD

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Gene Card

Best human hits

RAB1A; RAB1B; RAB35

Species

B.schlosseri

Unique Gene ID

Boschl.g00016271

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g16271

Location

chrUn:105502191..105503066

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g16271.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Small_GTPase Pfam Small GTPase superfamily
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
mitotic cytokinesis Hs biological process
GTPase activity Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function
mitochondrion Hs cellular component
endosome Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
clathrin-coated pit Hs cellular component
protein localization Hs biological process
endosome membrane Hs cellular component
protein transport Hs biological process
membrane Hs cellular component
endosomal transport Hs biological process
GDP binding Hs molecular function
antigen processing and presentation Hs biological process
clathrin-coated vesicle Hs cellular component
clathrin-coated vesicle membrane Hs cellular component
neuron projection development Hs biological process
cell projection membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
endocytic recycling Hs biological process
protein localization to endosome Hs biological process
melanosome Hs cellular component
intercellular bridge Hs cellular component
clathrin-coated endocytic vesicle Hs cellular component
plasma membrane to endosome transport Hs biological process
recycling endosome membrane Hs cellular component
extracellular exosome Hs cellular component
anchored component of synaptic vesicle membrane Hs cellular component

GO (Blast)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 128 4.64e-39
nucleotide binding Hs molecular function 155 1.25e-49
GTPase activity Hs molecular function 155 1.25e-49
protein binding Hs molecular function 155 1.25e-49
GTP binding Hs molecular function 155 1.25e-49
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function 155 1.25e-49
cytoplasm Hs cellular component 128 4.64e-39
mitochondrion Hs cellular component 155 1.25e-49
endosome Hs cellular component 155 1.25e-49
early endosome Hs cellular component 128 5.58e-39
endoplasmic reticulum Hs cellular component 128 5.58e-39
endoplasmic reticulum membrane Hs cellular component 128 4.64e-39
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component 128 4.64e-39
Golgi apparatus Hs cellular component 128 4.64e-39
cytosol Hs cellular component 155 1.25e-49
plasma membrane Hs cellular component 155 1.25e-49
clathrin-coated pit Hs cellular component 155 1.25e-49
endosome membrane Hs cellular component 155 1.25e-49
membrane Hs cellular component 155 1.25e-49
GDP binding Hs molecular function 155 1.25e-49
transport vesicle Hs cellular component 128 4.64e-39
clathrin-coated vesicle Hs cellular component 155 1.25e-49
transport vesicle membrane Hs cellular component 128 5.58e-39
clathrin-coated vesicle membrane Hs cellular component 155 1.25e-49
cell projection membrane Hs cellular component 155 1.25e-49
cytoplasmic vesicle Hs cellular component 155 1.25e-49
endoplasmic reticulum-Golgi intermediate compartment membrane Hs cellular component 128 4.64e-39
pre-autophagosomal structure membrane Hs cellular component 128 4.64e-39
melanosome Hs cellular component 155 1.25e-49
intercellular bridge Hs cellular component 155 1.25e-49
cadherin binding Hs molecular function 128 5.58e-39
clathrin-coated endocytic vesicle Hs cellular component 155 1.25e-49
recycling endosome membrane Hs cellular component 155 1.25e-49
extracellular exosome Hs cellular component 155 1.25e-49
anchored component of synaptic vesicle membrane Hs cellular component 155 1.25e-49

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 3.1E-30
GTP binding Pfam molecular function 3.1E-30