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GENE CARD

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  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

MEX3B; MEX3C; MEX3D

Species

B.schlosseri

Unique Gene ID

Boschl.g00012368

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g12368

Location

chrUn:79269510..79271562

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g12368.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
KH_dom SMART K Homology domain
KH_dom_type_1_sf Gene3D K Homology domain, type 1 superfamily
Znf_RING SMART Zinc finger, RING-type
KH_dom_type_1_sf SUPERFAMILY K Homology domain, type 1 superfamily
Znf_RING ProSiteProfiles Zinc finger, RING-type
KH_dom_type_1 Pfam K Homology domain, type 1
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
P-body Hs cellular component
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
protein phosphorylation Hs biological process
mRNA localization resulting in posttranscriptional regulation of gene expression Hs biological process
transferase activity Hs molecular function
AU-rich element binding Hs molecular function
protein autophosphorylation Hs biological process
metal ion binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
mRNA destabilization Hs biological process
energy homeostasis Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
P-body Hs cellular component 308 3.92e-98
nucleic acid binding Hs molecular function 318 8.88e-101
RNA binding Hs molecular function 318 8.88e-101
calcium ion binding Hs molecular function 308 3.92e-98
protein binding Hs molecular function 285 3.06e-88
nucleus Hs cellular component 318 8.88e-101
nucleoplasm Hs cellular component 308 3.92e-98
cytoplasm Hs cellular component 318 8.88e-101
cytosol Hs cellular component 308 3.92e-98
transferase activity Hs molecular function 285 3.06e-88
AU-rich element binding Hs molecular function 318 8.88e-101
metal ion binding Hs molecular function 318 8.88e-101
perinuclear region of cytoplasm Hs cellular component 318 8.88e-101

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 8.1E-16
RNA binding Gene3D molecular function 8.0E-21