Aniseed - Gene card

Gene Card

Best human hits

TRAF3; TRAF5; TRAF6

Species

B.schlosseri

Unique Gene ID

Boschl.g00010617

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g10617

Location

chrUn:68454406..68463415

Transcript Models and Sequences

Boschl.CG.Botznik2013.chrUn.g10617.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type
Znf_TRAF	Pfam	Zinc finger, TRAF-type
TRAF-like	SUPERFAMILY	TRAF-like
Znf_TRAF	ProSiteProfiles	Zinc finger, TRAF-type

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

73 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
activation of MAPK activity	Hs	biological process
protein polyubiquitination	Hs	biological process
ossification	Hs	biological process
neural tube closure	Hs	biological process
toll-like receptor signaling pathway	Hs	biological process
immune system process	Hs	biological process
MyD88-dependent toll-like receptor signaling pathway	Hs	biological process
ubiquitin-protein transferase activity	Hs	molecular function
tumor necrosis factor receptor binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
lipid droplet	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
cell cortex	Hs	cellular component
immune response	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
signal transduction	Hs	biological process
I-kappaB kinase/NF-kappaB signaling	Hs	biological process
activation of NF-kappaB-inducing kinase activity	Hs	biological process
JNK cascade	Hs	biological process
zinc ion binding	Hs	molecular function
animal organ morphogenesis	Hs	biological process
cytoplasmic side of plasma membrane	Hs	cellular component
endosome membrane	Hs	cellular component
protein ubiquitination	Hs	biological process
protein deubiquitination	Hs	biological process
transferase activity	Hs	molecular function
cytokine-mediated signaling pathway	Hs	biological process
antigen processing and presentation of exogenous peptide antigen via MHC class II	Hs	biological process
protein kinase binding	Hs	molecular function
osteoclast differentiation	Hs	biological process
membrane protein intracellular domain proteolysis	Hs	biological process
positive regulation of protein ubiquitination	Hs	biological process
mitogen-activated protein kinase kinase kinase binding	Hs	molecular function
ubiquitin conjugating enzyme binding	Hs	molecular function
ubiquitin protein ligase binding	Hs	molecular function
thioesterase binding	Hs	molecular function
activation of protein kinase activity	Hs	biological process
macromolecular complex	Hs	cellular component
toll-like receptor 9 signaling pathway	Hs	biological process
CD40 receptor complex	Hs	cellular component
Fc-epsilon receptor signaling pathway	Hs	biological process
T-helper 1 type immune response	Hs	biological process
identical protein binding	Hs	molecular function
histone deacetylase binding	Hs	molecular function
regulation of apoptotic process	Hs	biological process
myeloid dendritic cell differentiation	Hs	biological process
positive regulation of apoptotic process	Hs	biological process
negative regulation of apoptotic process	Hs	biological process
regulation of I-kappaB kinase/NF-kappaB signaling	Hs	biological process
positive regulation of I-kappaB kinase/NF-kappaB signaling	Hs	biological process
protein kinase B binding	Hs	molecular function
positive regulation of JUN kinase activity	Hs	biological process
positive regulation of interleukin-6 biosynthetic process	Hs	biological process
bone resorption	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
bone remodeling	Hs	biological process
metal ion binding	Hs	molecular function
protein N-terminus binding	Hs	molecular function
cell development	Hs	biological process
perinuclear region of cytoplasm	Hs	cellular component
T cell receptor signaling pathway	Hs	biological process
positive regulation of sequence-specific DNA binding transcription factor activity	Hs	biological process
positive regulation of NF-kappaB transcription factor activity	Hs	biological process
protein autoubiquitination	Hs	biological process
ubiquitin protein ligase activity	Hs	molecular function
interleukin-1-mediated signaling pathway	Hs	biological process
protein K63-linked ubiquitination	Hs	biological process
cellular response to lipopolysaccharide	Hs	biological process

GO (Blast)

32 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin-protein transferase activity	Hs	molecular function	115	3.46e-29
signal transducer activity	Hs	molecular function	67.4	1.42e-12
tumor necrosis factor receptor binding	Hs	molecular function	115	3.46e-29
protein binding	Hs	molecular function	115	3.46e-29
nucleus	Hs	cellular component	115	3.46e-29
cytoplasm	Hs	cellular component	115	3.46e-29
mitochondrion	Hs	cellular component	67.4	1.42e-12
endosome	Hs	cellular component	67.4	1.42e-12
lipid droplet	Hs	cellular component	115	3.46e-29
centrosome	Hs	cellular component	84.3	3.34e-18
cytosol	Hs	cellular component	115	3.46e-29
plasma membrane	Hs	cellular component	115	3.46e-29
cell cortex	Hs	cellular component	115	3.46e-29
zinc ion binding	Hs	molecular function	115	3.46e-29
cytoplasmic side of plasma membrane	Hs	cellular component	115	3.46e-29
endosome membrane	Hs	cellular component	115	3.46e-29
transferase activity	Hs	molecular function	115	3.46e-29
protein kinase binding	Hs	molecular function	115	3.46e-29
protein phosphatase binding	Hs	molecular function	67.4	1.42e-12
mitogen-activated protein kinase kinase kinase binding	Hs	molecular function	115	3.46e-29
ubiquitin conjugating enzyme binding	Hs	molecular function	115	3.46e-29
ubiquitin protein ligase binding	Hs	molecular function	115	3.46e-29
thioesterase binding	Hs	molecular function	115	3.46e-29
macromolecular complex	Hs	cellular component	115	3.46e-29
CD40 receptor complex	Hs	cellular component	115	3.46e-29
identical protein binding	Hs	molecular function	115	3.46e-29
histone deacetylase binding	Hs	molecular function	115	3.46e-29
protein kinase B binding	Hs	molecular function	115	3.46e-29
metal ion binding	Hs	molecular function	115	3.46e-29
protein N-terminus binding	Hs	molecular function	115	3.46e-29
perinuclear region of cytoplasm	Hs	cellular component	115	3.46e-29
ubiquitin protein ligase activity	Hs	molecular function	115	3.46e-29

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	1.5E-6
zinc ion binding	Pfam	molecular function	1.4E-7