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GENE CARD

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Gene Card

Best human hits

PPID; SPAG1; TTC4

Species

B.schlosseri

Unique Gene ID

Boschl.g00010111

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g10111

Location

chrUn:65280252..65282027

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g10111.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
TPR-contain_dom ProSiteProfiles Tetratricopeptide repeat-containing domain
TPR-like_helical_dom_sf Gene3D Tetratricopeptide-like helical domain superfamily
TPR_repeat SMART Tetratricopeptide repeat
TPR-like_helical_dom_sf SUPERFAMILY Tetratricopeptide-like helical domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

1 result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 55.5 1.73e-08
peptidyl-prolyl cis-trans isomerase activity Hs molecular function 46.6 7.12e-06
protein binding Hs molecular function 167 3.23e-49
GTP binding Hs molecular function 55.5 1.73e-08
nucleus Hs cellular component 46.6 7.12e-06
nucleoplasm Hs cellular component 46.6 7.12e-06
nucleolus Hs cellular component 46.6 7.12e-06
cytoplasm Hs cellular component 55.5 1.73e-08
cytosol Hs cellular component 55.5 1.73e-08
transcription factor binding Hs molecular function 46.6 7.12e-06
cyclosporin A binding Hs molecular function 46.6 7.12e-06
hydrolase activity Hs molecular function 55.5 1.73e-08
isomerase activity Hs molecular function 46.6 7.12e-06
estrogen receptor binding Hs molecular function 46.6 7.12e-06
Hsp70 protein binding Hs molecular function 46.6 7.12e-06
heat shock protein binding Hs molecular function 46.6 7.12e-06
Hsp90 protein binding Hs molecular function 46.6 7.12e-06

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 6.8E-17