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GENE CARD

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  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

PRDM10; PRDM15; PRDM4

Species

B.schlosseri

Unique Gene ID

Boschl.g00010067

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g10067

Location

chrUn:65006775..65009169

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g10067.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
SET_dom ProSiteProfiles SET domain
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
methyltransferase activity Hs molecular function
transferase activity Hs molecular function
methylation Hs biological process
metal ion binding Hs molecular function

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 100 1.30e-21
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 100 1.30e-21
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 100 1.30e-21
nucleic acid binding Hs molecular function 175 4.30e-45
DNA binding Hs molecular function 175 4.30e-45
protein binding Hs molecular function 175 4.30e-45
nucleus Hs cellular component 175 4.30e-45
nucleoplasm Hs cellular component 93.6 2.51e-19
cytoplasm Hs cellular component 100 1.30e-21
methyltransferase activity Hs molecular function 175 4.30e-45
zinc ion binding Hs molecular function 100 1.30e-21
nuclear body Hs cellular component 93.6 2.51e-19
transferase activity Hs molecular function 175 4.30e-45
histone methyltransferase complex Hs cellular component 100 1.30e-21
metal ion binding Hs molecular function 175 4.30e-45
histone methyltransferase binding Hs molecular function 100 1.30e-21

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 0.0069
protein binding ProSiteProfiles molecular function 8.628