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  1. Gene 'Boschl.CG.Botznik201...' > 

Gene Card

Best human hits

DMC1; RAD51; RAD51B

Species

B.schlosseri

Unique Gene ID

Boschl.g00007745

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g07745

Location

chrUn:50512053..50516982

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g07745.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
RecA_monomer-monomer_interface ProSiteProfiles DNA recombination and repair protein RecA, monomer-monomer interface
RecA_ATP-bd ProSiteProfiles DNA recombination and repair protein RecA-like, ATP-binding domain
AAA+_ATPase SMART AAA+ ATPase domain
DNA_recomb/repair_Rad51_C Pfam DNA recombination and repair protein Rad51-like, C-terminal
Rad51_DMC1_RadA CDD Rad51/DMC1/RadA

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

56 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
recombinase activity Hs molecular function
nucleotide binding Hs molecular function
nuclear chromosome Hs cellular component
four-way junction DNA binding Hs molecular function
telomere maintenance via recombination Hs biological process
double-strand break repair via homologous recombination Hs biological process
DNA recombinase assembly Hs biological process
DNA synthesis involved in DNA repair Hs biological process
strand displacement Hs biological process
nuclear chromosome, telomeric region Hs cellular component
chromatin Hs cellular component
nuclear chromatin Hs cellular component
condensed chromosome Hs cellular component
condensed nuclear chromosome Hs cellular component
lateral element Hs cellular component
DNA binding Hs molecular function
double-stranded DNA binding Hs molecular function
single-stranded DNA binding Hs molecular function
endodeoxyribonuclease activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
mitochondrial matrix Hs cellular component
microtubule organizing center Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
DNA metabolic process Hs biological process
DNA unwinding involved in DNA replication Hs biological process
DNA repair Hs biological process
DNA recombination Hs biological process
mitotic recombination Hs biological process
cellular response to DNA damage stimulus Hs biological process
reciprocal meiotic recombination Hs biological process
protein C-terminus binding Hs molecular function
DNA-dependent ATPase activity Hs molecular function
regulation of double-strand break repair via homologous recombination Hs biological process
telomere maintenance via telomere lengthening Hs biological process
PML body Hs cellular component
replication fork processing Hs biological process
macromolecular complex Hs cellular component
site of double-strand break Hs cellular component
interstrand cross-link repair Hs biological process
strand invasion Hs biological process
identical protein binding Hs molecular function
single-stranded DNA-dependent ATPase activity Hs molecular function
perinuclear region of cytoplasm Hs cellular component
protein homooligomerization Hs biological process
meiotic cell cycle Hs biological process
DNA polymerase binding Hs molecular function
chromosome organization involved in meiotic cell cycle Hs biological process
cellular response to ionizing radiation Hs biological process
mitotic recombination-dependent replication fork processing Hs biological process

GO (Blast)

40 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
recombinase activity Hs molecular function 405 1.73e-143
nucleotide binding Hs molecular function 405 1.73e-143
nuclear chromosome Hs cellular component 405 1.73e-143
four-way junction DNA binding Hs molecular function 405 1.73e-143
chromosome, telomeric region Hs cellular component 250 2.22e-82
nuclear chromosome, telomeric region Hs cellular component 405 1.73e-143
chromatin Hs cellular component 405 1.73e-143
nuclear chromatin Hs cellular component 405 1.73e-143
condensed chromosome Hs cellular component 405 1.73e-143
condensed nuclear chromosome Hs cellular component 405 1.73e-143
lateral element Hs cellular component 405 1.73e-143
DNA binding Hs molecular function 405 1.73e-143
double-stranded DNA binding Hs molecular function 405 1.73e-143
single-stranded DNA binding Hs molecular function 405 1.73e-143
endodeoxyribonuclease activity Hs molecular function 405 1.73e-143
protein binding Hs molecular function 405 1.73e-143
ATP binding Hs molecular function 405 1.73e-143
nucleus Hs cellular component 405 1.73e-143
nucleoplasm Hs cellular component 405 1.73e-143
replication fork Hs cellular component 83.2 3.34e-18
chromosome Hs cellular component 250 2.22e-82
nucleolus Hs cellular component 405 1.73e-143
cytoplasm Hs cellular component 405 1.73e-143
mitochondrion Hs cellular component 405 1.73e-143
mitochondrial matrix Hs cellular component 405 1.73e-143
microtubule organizing center Hs cellular component 405 1.73e-143
cytosol Hs cellular component 405 1.73e-143
cytoskeleton Hs cellular component 405 1.73e-143
protein C-terminus binding Hs molecular function 405 1.73e-143
DNA-dependent ATPase activity Hs molecular function 405 1.73e-143
membrane Hs cellular component 83.2 3.34e-18
integral component of membrane Hs cellular component 83.2 3.34e-18
PML body Hs cellular component 405 1.73e-143
macromolecular complex Hs cellular component 405 1.73e-143
Rad51B-Rad51C-Rad51D-XRCC2 complex Hs cellular component 83.2 3.34e-18
site of double-strand break Hs cellular component 405 1.73e-143
identical protein binding Hs molecular function 405 1.73e-143
single-stranded DNA-dependent ATPase activity Hs molecular function 405 1.73e-143
perinuclear region of cytoplasm Hs cellular component 405 1.73e-143
DNA polymerase binding Hs molecular function 405 1.73e-143

GO (InterProScan)

5 results

GO Term Analysis Type e-value
DNA binding CDD molecular function 4.70615E-134
ATP binding ProSiteProfiles molecular function 20.766
DNA metabolic process ProSiteProfiles biological process 20.766
DNA repair ProSiteProfiles biological process 35.551
DNA-dependent ATPase activity ProSiteProfiles molecular function 20.766

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