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Gene Card

Best human hits

ACTB; ACTG1; ACTG2

Species

B.schlosseri

Unique Gene ID

Boschl.g00007388

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g07388

Location

chrUn:48267210..48267966

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g07388.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Actin Pfam Actin family
Actin/actin-like_CS ProSitePatterns Actin/actin-like conserved site
Actin PRINTS Actin family
Actin SMART Actin family
Actin PANTHER Actin family
Actin_CS ProSitePatterns Actin, conserved site

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

53 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
nuclear chromatin Hs cellular component
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function
retina homeostasis Hs biological process
structural constituent of cytoskeleton Hs molecular function
protein binding Hs molecular function
profilin binding Hs molecular function
ATP binding Hs molecular function
extracellular space Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
actin filament Hs cellular component
plasma membrane Hs cellular component
focal adhesion Hs cellular component
response to mechanical stimulus Hs biological process
actin cytoskeleton Hs cellular component
membrane Hs cellular component
protein deubiquitination Hs biological process
kinesin binding Hs molecular function
protein kinase binding Hs molecular function
myofibril Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
Tat protein binding Hs molecular function
nucleosomal DNA binding Hs molecular function
ubiquitin protein ligase binding Hs molecular function
filamentous actin Hs cellular component
vesicle Hs cellular component
negative regulation of protein binding Hs biological process
macromolecular complex Hs cellular component
NuA4 histone acetyltransferase complex Hs cellular component
cytoplasmic ribonucleoprotein granule Hs cellular component
identical protein binding Hs molecular function
ATP-dependent chromatin remodeling Hs biological process
myelin sheath Hs cellular component
sarcomere organization Hs biological process
phagocytic vesicle Hs cellular component
positive regulation of gene expression, epigenetic Hs biological process
vascular endothelial growth factor receptor signaling pathway Hs biological process
ephrin receptor signaling pathway Hs biological process
cell motility Hs biological process
nitric-oxide synthase binding Hs molecular function
response to calcium ion Hs biological process
membrane organization Hs biological process
extracellular exosome Hs cellular component
platelet aggregation Hs biological process
cellular response to interferon-gamma Hs biological process
blood microparticle Hs cellular component
dense body Hs cellular component
structural constituent of postsynaptic actin cytoskeleton Hs molecular function

GO (Blast)

44 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 414 1.49e-147
nuclear chromatin Hs cellular component 413 4.02e-147
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 413 4.02e-147
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 413 4.02e-147
structural constituent of cytoskeleton Hs molecular function 414 1.49e-147
protein binding Hs molecular function 414 1.49e-147
profilin binding Hs molecular function 414 1.49e-147
ATP binding Hs molecular function 414 1.49e-147
extracellular space Hs cellular component 414 1.49e-147
nucleus Hs cellular component 414 1.49e-147
nucleoplasm Hs cellular component 413 4.02e-147
cytoplasm Hs cellular component 414 1.49e-147
cytosol Hs cellular component 414 1.49e-147
cytoskeleton Hs cellular component 414 1.49e-147
actin filament Hs cellular component 414 1.49e-147
plasma membrane Hs cellular component 414 1.49e-147
focal adhesion Hs cellular component 414 1.49e-147
actin cytoskeleton Hs cellular component 414 1.49e-147
membrane Hs cellular component 414 1.49e-147
kinesin binding Hs molecular function 413 4.02e-147
protein kinase binding Hs molecular function 413 4.02e-147
myofibril Hs cellular component 414 1.49e-147
lamellipodium Hs cellular component 397 1.18e-140
filopodium Hs cellular component 397 1.18e-140
intracellular ribonucleoprotein complex Hs cellular component 413 4.02e-147
Tat protein binding Hs molecular function 413 4.02e-147
nucleosomal DNA binding Hs molecular function 413 4.02e-147
ubiquitin protein ligase binding Hs molecular function 414 1.49e-147
filamentous actin Hs cellular component 414 1.49e-147
vesicle Hs cellular component 413 4.02e-147
myosin filament Hs cellular component 397 1.18e-140
macromolecular complex Hs cellular component 413 4.02e-147
NuA4 histone acetyltransferase complex Hs cellular component 413 4.02e-147
cytoplasmic ribonucleoprotein granule Hs cellular component 413 4.02e-147
identical protein binding Hs molecular function 414 1.49e-147
myelin sheath Hs cellular component 414 1.49e-147
cell body Hs cellular component 397 1.18e-140
phagocytic vesicle Hs cellular component 414 1.49e-147
nitric-oxide synthase binding Hs molecular function 413 4.02e-147
extracellular exosome Hs cellular component 414 1.49e-147
cell periphery Hs cellular component 397 1.18e-140
blood microparticle Hs cellular component 414 1.49e-147
dense body Hs cellular component 414 1.49e-147
structural constituent of postsynaptic actin cytoskeleton Hs molecular function 413 4.02e-147

GO (InterProScan)

No result

GO Term Analysis Type e-value

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