Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

NFX1; NFXL1; ZNFX1

Species

B.schlosseri

Unique Gene ID

Boschl.g00006979

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g06979

Location

chrUn:45683869..45686932

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g06979.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
NFX1_fam PANTHER Transcription factor NFX1 family
Zinc_finger_PHD-type_CS ProSitePatterns Zinc finger, PHD-type, conserved site
R3H_dom SMART R3H domain
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_NFX1 SMART Zinc finger, NF-X1-type
R3H_dom ProSiteProfiles R3H domain
R3H_dom_sf Gene3D R3H domain superfamily
R3H_dom Pfam R3H domain
Znf_PHD-finger ProSiteProfiles Zinc finger, PHD-finger
Znf_NFX1 Pfam Zinc finger, NF-X1-type
R3H_dom_sf SUPERFAMILY R3H domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 705 0.0
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 705 0.0
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 705 0.0
nucleic acid binding Hs molecular function 705 0.0
DNA binding Hs molecular function 705 0.0
transcription factor activity, sequence-specific DNA binding Hs molecular function 705 0.0
RNA binding Hs molecular function 705 0.0
binding Hs molecular function 52.0 1.93e-06
nucleus Hs cellular component 705 0.0
nucleolus Hs cellular component 705 0.0
cytosol Hs cellular component 705 0.0
plasma membrane Hs cellular component 705 0.0
zinc ion binding Hs molecular function 705 0.0
membrane Hs cellular component 253 1.07e-70
integral component of membrane Hs cellular component 253 1.07e-70
transferase activity Hs molecular function 705 0.0
metal ion binding Hs molecular function 705 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 6.2E-17
transcription factor activity, sequence-specific DNA binding PANTHER molecular function 1.3E-296
nucleus Pfam cellular component 2.1E-5
regulation of transcription, DNA-templated Pfam biological process 2.1E-5
zinc ion binding Pfam molecular function 2.1E-5