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GENE CARD

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Gene Card

Best human hits

QKI; SF1

Species

B.schlosseri

Unique Gene ID

Boschl.g00000620

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g00620

Location

chrUn:4063824..4064727

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g00620.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Znf_CCHC_sf SUPERFAMILY Zinc finger, CCHC-type superfamily
Znf_CCHC SMART Zinc finger, CCHC-type
BBP/SF1 PANTHER BBP/SF1 family
KH_dom_type_1_sf Gene3D K Homology domain, type 1 superfamily
Znf_CCHC ProSiteProfiles Zinc finger, CCHC-type
Znf_CCHC Pfam Zinc finger, CCHC-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 116 1.59e-31
transcription corepressor activity Hs molecular function 116 1.59e-31
RNA binding Hs molecular function 116 1.59e-31
mRNA binding Hs molecular function 38.5 4.16e-04
protein binding Hs molecular function 116 1.59e-31
nucleus Hs cellular component 116 1.59e-31
nucleoplasm Hs cellular component 116 1.59e-31
spliceosomal complex Hs cellular component 116 1.59e-31
cytoplasm Hs cellular component 38.5 4.16e-04
ribosome Hs cellular component 116 1.59e-31
zinc ion binding Hs molecular function 116 1.59e-31
nuclear body Hs cellular component 116 1.59e-31
SH3 domain binding Hs molecular function 38.5 4.16e-04
identical protein binding Hs molecular function 116 1.59e-31
pre-mRNA branch point binding Hs molecular function 116 1.59e-31
metal ion binding Hs molecular function 116 1.59e-31

GO (InterProScan)

5 results

GO Term Analysis Type e-value
mRNA splicing, via spliceosome PANTHER biological process 8.2E-36
nucleic acid binding SUPERFAMILY molecular function 2.44E-5
RNA binding PANTHER molecular function 8.2E-36
zinc ion binding SUPERFAMILY molecular function 2.44E-5
pre-mRNA branch point binding PANTHER molecular function 8.2E-36