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GENE CARD

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  1. Gene 'Harore.CG.MTP2014.S3...' > 

Gene Card

Best human hits

LRP1; LRP1B; SORL1

Species

B.schlosseri

Unique Gene ID

Boschl.g00048417

Gene Model ID

Boschl.CG.Botznik2013.chr9.g48417

Location

chr9:9012258..9025603

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr9.g48417.01.t

External Database Gene Card

External database links

No result

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

17 results

IPR Term Analysis Definition
LDrepeatLR_classA_rpt ProSiteProfiles Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt SMART Low-density lipoprotein (LDL) receptor class A repeat
LDL_receptor-like_sf SUPERFAMILY LDL receptor-like superfamily
LDrepeatLR_classA_rpt CDD Low-density lipoprotein (LDL) receptor class A repeat
FN3_dom ProSiteProfiles Fibronectin type III
LDrepeatLR_classA_rpt PRINTS Low-density lipoprotein (LDL) receptor class A repeat
Kringle Pfam Kringle
Kringle SMART Kringle
FN3_sf SUPERFAMILY Fibronectin type III superfamily
LDLR_class-A_CS ProSitePatterns Low-density lipoprotein (LDL) receptor class A, conserved site
Kringle_CS ProSitePatterns Kringle, conserved site
FN3_dom CDD Fibronectin type III
Kringle ProSiteProfiles Kringle
Kringle_sf Gene3D Kringle superfamily
LDrepeatLR_classA_rpt Pfam Low-density lipoprotein (LDL) receptor class A repeat
Kringle-like SUPERFAMILY Kringle-like fold
Ig-like_fold Gene3D Immunoglobulin-like fold

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

50 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 156 7.42e-39
amyloid-beta binding Hs molecular function 156 7.42e-39
protease binding Hs molecular function 141 4.92e-34
RNA binding Hs molecular function 141 4.92e-34
receptor activity Hs molecular function 141 4.92e-34
transmembrane signaling receptor activity Hs molecular function 156 7.42e-39
low-density lipoprotein receptor activity Hs molecular function 156 7.42e-39
scavenger receptor activity Hs molecular function 141 4.92e-34
calcium ion binding Hs molecular function 141 4.92e-34
protein binding Hs molecular function 156 7.42e-39
extracellular region Hs cellular component 156 7.42e-39
extracellular space Hs cellular component 156 7.42e-39
nucleus Hs cellular component 141 4.92e-34
nuclear envelope lumen Hs cellular component 156 7.42e-39
cytoplasm Hs cellular component 141 4.92e-34
lysosomal membrane Hs cellular component 141 4.92e-34
endosome Hs cellular component 156 7.42e-39
early endosome Hs cellular component 156 7.42e-39
endoplasmic reticulum Hs cellular component 156 7.42e-39
Golgi apparatus Hs cellular component 156 7.42e-39
trans-Golgi network Hs cellular component 156 7.42e-39
plasma membrane Hs cellular component 141 4.92e-34
integral component of plasma membrane Hs cellular component 156 7.42e-39
clathrin-coated pit Hs cellular component 141 4.92e-34
focal adhesion Hs cellular component 141 4.92e-34
endosome membrane Hs cellular component 156 7.42e-39
membrane Hs cellular component 156 7.42e-39
integral component of membrane Hs cellular component 156 7.42e-39
basolateral plasma membrane Hs cellular component 141 4.92e-34
alpha-2 macroglobulin receptor activity Hs molecular function 141 4.92e-34
clathrin-coated vesicle Hs cellular component 141 4.92e-34
low-density lipoprotein particle binding Hs molecular function 156 7.42e-39
apolipoprotein receptor activity Hs molecular function 141 4.92e-34
ADP-ribosylation factor binding Hs molecular function 156 7.42e-39
dendrite Hs cellular component 141 4.92e-34
endocytic vesicle membrane Hs cellular component 141 4.92e-34
Golgi cisterna Hs cellular component 156 7.42e-39
clathrin heavy chain binding Hs molecular function 141 4.92e-34
apolipoprotein binding Hs molecular function 141 4.92e-34
low-density lipoprotein particle Hs cellular component 156 7.42e-39
lipoprotein transporter activity Hs molecular function 141 4.92e-34
neuronal cell body Hs cellular component 141 4.92e-34
receptor complex Hs cellular component 141 4.92e-34
heparan sulfate proteoglycan binding Hs molecular function 141 4.92e-34
macromolecular complex binding Hs molecular function 141 4.92e-34
metal ion binding Hs molecular function 141 4.92e-34
recycling endosome Hs cellular component 156 7.42e-39
extracellular exosome Hs cellular component 156 7.42e-39
lipoprotein particle receptor binding Hs molecular function 141 4.92e-34
plasma membrane protein complex Hs cellular component 141 4.92e-34

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding PRINTS molecular function 4.5E-38

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