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GENE CARD

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Gene Card

Best human hits

SMTN; SMTNL1; SMTNL2

Species

B.schlosseri

Unique Gene ID

Boschl.g00039942

Gene Model ID

Boschl.CG.Botznik2013.chr7.g39942

Location

chr7:9280129..9290539

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr7.g39942.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
CH-domain CDD Calponin homology domain
CH-domain ProSiteProfiles Calponin homology domain
CH-domain Pfam Calponin homology domain
CH_dom_sf SUPERFAMILY CH domain superfamily
CH_dom_sf Gene3D CH domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

1 result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
actin binding Hs molecular function 189 1.91e-52
protein binding Hs molecular function 189 1.91e-52
calmodulin binding Hs molecular function 123 7.02e-31
tropomyosin binding Hs molecular function 123 7.02e-31
nucleus Hs cellular component 123 7.02e-31
cytoplasm Hs cellular component 189 1.91e-52
cytoskeleton Hs cellular component 189 1.91e-52
protein phosphatase 1 binding Hs molecular function 123 7.02e-31
structural constituent of muscle Hs molecular function 189 1.91e-52
actin cytoskeleton Hs cellular component 189 1.91e-52
myofibril Hs cellular component 123 7.02e-31
M band Hs cellular component 123 7.02e-31
I band Hs cellular component 123 7.02e-31
contractile fiber Hs cellular component 123 7.02e-31
protein self-association Hs molecular function 123 7.02e-31
CH domain binding Hs molecular function 123 7.02e-31
disordered domain specific binding Hs molecular function 123 7.02e-31

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding CDD molecular function 5.71015E-17